Alternatives and similar repositories for code

Users that are interested in code are comparing it to the libraries listed below

• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆29Updated 3 weeks ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆131Updated 2 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆76Updated 5 months ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆106Updated 9 months ago
• AllenNeuralDynamics / aind-ephys-spikesort-kilosort25-full
  CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
  ☆12Updated last year
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated 2 years ago
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆38Updated last month
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆66Updated this week
• spkware / chronic_holder
  Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.
  ☆23Updated 2 weeks ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆48Updated 4 months ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated this week
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated 2 years ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆83Updated last year
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆110Updated last month
• katemartian / Photometry_data_processing
  ☆26Updated 2 years ago
• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆13Updated last month
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆96Updated this week
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆72Updated 2 weeks ago
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆29Updated last month
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated last month
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆27Updated 6 years ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆63Updated last week
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆120Updated last year
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆62Updated 2 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆95Updated last year
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆65Updated last year
• tridesclous / tridesclous
  offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.
  ☆54Updated last month
• open-ephys / open-ephys-python-tools
  Python code for interacting with the Open Ephys GUI
  ☆40Updated last week
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆66Updated 9 months ago