Alternatives and similar repositories for Pymol-script-repo

Users that are interested in Pymol-script-repo are comparing it to the libraries listed below

• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake,…
  ☆596Updated last week
• haddocking / pdb-tools
  A dependency-free cross-platform swiss army knife for PDB files.
  ☆432Updated 3 weeks ago
• openmm / pdbfixer
  PDBFixer fixes problems in PDB files
  ☆594Updated last month
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆452Updated 3 weeks ago
• Valdes-Tresanco-MS / gmx_MMPBSA
  gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.
  ☆278Updated 3 months ago
• Discngine / fpocket
  fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…
  ☆396Updated last year
• ccsb-scripps / AutoDock-GPU
  AutoDock for GPUs and other accelerators
  ☆522Updated last month
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆355Updated 3 weeks ago
• jensengroup / propka
  PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.
  ☆321Updated last year
• williamgilpin / pypdb
  A Python API for the RCSB Protein Data Bank (PDB)
  ☆331Updated 4 months ago
• pb3lab / ibm3202
  Google Colab Tutorials for IBM3202
  ☆268Updated 11 months ago
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆222Updated last month
• ccsb-scripps / AutoDock-Vina
  AutoDock Vina
  ☆828Updated 2 weeks ago
• AngelRuizMoreno / Jupyter_Dock
  Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting f…
  ☆273Updated last year
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆623Updated last year
• chembl / chembl_webresource_client
  Official Python client for accessing ChEMBL API
  ☆423Updated 8 months ago
• KosinskiLab / AlphaPulldown
  ☆294Updated last week
• kalininalab / alphafold_non_docker
  AlphaFold2 non-docker setup
  ☆367Updated last year
• forlilab / Meeko
  Interface for AutoDock, molecule parameterization
  ☆304Updated last week
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆180Updated 6 years ago
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆360Updated last month
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆198Updated this week
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆331Updated last week
• gnina / gnina
  A deep learning framework for molecular docking
  ☆784Updated 2 months ago
• chemosim-lab / ProLIF
  Interaction Fingerprints for protein-ligand complexes and more
  ☆446Updated last month
• prody / ProDy
  A Python Package for Protein Dynamics Analysis
  ☆506Updated this week
• wallnerlab / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆331Updated 2 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆443Updated last year
• ChatMol / ChatMol
  ChatMol
  ☆236Updated 7 months ago
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆770Updated 4 months ago