Collected scripts for Pymol
☆529Mar 1, 2026Updated 4 months ago
Alternatives and similar repositories for Pymol-script-repo
Users that are interested in Pymol-script-repo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Dynamics PyMOL Plugin☆49Apr 19, 2024Updated 2 years ago
- Open-source foundation of the user-sponsored PyMOL molecular visualization system.☆1,718Updated this week
- PDBFixer fixes problems in PDB files☆664Mar 10, 2026Updated 4 months ago
- Pymol ScrIpt COllection (PSICO)☆66Mar 13, 2026Updated 4 months ago
- Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake,…☆702Jul 3, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆179Oct 10, 2019Updated 6 years ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆365Jul 14, 2026Updated last week
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆86Jul 10, 2026Updated last week
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆702Feb 27, 2026Updated 4 months ago
- Tutorials and examples for nicer animations (movies) and images in PyMOL.☆21Jan 29, 2015Updated 11 years ago
- Python3 translation of AutoDockTools☆145May 31, 2024Updated 2 years ago
- A dependency-free cross-platform swiss army knife for PDB files.☆456Jun 10, 2026Updated last month
- The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…☆88Sep 19, 2025Updated 10 months ago
- Interaction Fingerprints for protein-ligand complexes and more☆511Jun 21, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- AutoDock Vina☆1,031Feb 25, 2026Updated 4 months ago
- A deep learning framework for molecular docking☆955Jun 29, 2026Updated 3 weeks ago
- AutoDock for GPUs and other accelerators☆600Updated this week
- gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.☆321Jul 13, 2026Updated last week
- A Python Package for Protein Dynamics Analysis☆554Updated this week
- A collection of PyMOL plugins to visualize atomic bonds.☆22Sep 2, 2020Updated 5 years ago
- APBS - software for biomolecular electrostatics and solvation☆132Jul 27, 2020Updated 5 years ago
- PyAutoFEP: an automated FEP workflow for GROMACS integrating enhanced sampling methods☆211Sep 22, 2023Updated 2 years ago
- Accurately speed up AutoDock Vina☆172Nov 7, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.☆173Apr 26, 2026Updated 2 months ago
- Interface for AutoDock, molecule parameterization☆379Jul 10, 2026Updated last week
- A Consensus Docking Plugin for PyMOL☆86Jun 10, 2024Updated 2 years ago
- Predict the binding affinity of protein-protein complexes from structural data☆191Oct 3, 2025Updated 9 months ago
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆764Jun 19, 2024Updated 2 years ago
- A Python API for the RCSB Protein Data Bank (PDB)☆335Jun 22, 2026Updated last month
- Protein folding in Pymol☆149Nov 23, 2025Updated 7 months ago
- An accurate and trainable end-to-end protein-ligand docking framework☆140Mar 24, 2025Updated last year
- A command line application to launch molecular dynamics simulations with OpenMM☆40Apr 7, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ChatMol☆357Mar 16, 2026Updated 4 months ago
- An open tool implementing some recommended practices for analyzing alchemical free energy calculations☆139May 24, 2024Updated 2 years ago
- A PyMOL Plugin for calculating docking box for LeDock, AutoDock and AutoDock Vina.☆126Jun 6, 2019Updated 7 years ago
- ☆157Aug 17, 2022Updated 3 years ago
- Parameter/topology editor and molecular simulator☆451Jul 1, 2026Updated 2 weeks ago
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆300Dec 23, 2025Updated 6 months ago
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…☆490Mar 9, 2026Updated 4 months ago