Pymol-Scripts / Pymol-script-repo
Collected scripts for Pymol
β464Updated last month
Alternatives and similar repositories for Pymol-script-repo:
Users that are interested in Pymol-script-repo are comparing it to the libraries listed below
- Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to π Adasme β¦β508Updated 2 months ago
- PDBFixer fixes problems in PDB filesβ527Updated 2 weeks ago
- gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.β247Updated last week
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scienβ¦β330Updated 6 months ago
- Cloud-based molecular simulations for everyoneβ425Updated this week
- A dependency-free cross-platform swiss army knife for PDB files.β400Updated 6 months ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.β287Updated last year
- AutoDock for GPUs and other acceleratorsβ453Updated last month
- AutoDock Vinaβ685Updated 2 weeks ago
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.β294Updated last week
- Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting fβ¦β266Updated last year
- Application to assign secondary structure to proteinsβ186Updated 3 weeks ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Modelsβ261Updated 2 months ago
- Interface for AutoDock, molecule parameterizationβ230Updated this week
- A deep learning framework for molecular dockingβ679Updated 2 weeks ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure filesβ175Updated 5 years ago
- User friendly and accurate binder design pipelineβ467Updated last week
- β293Updated 7 months ago
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithmβ326Updated 3 months ago
- Protein hallucination and inpainting with RoseTTAFoldβ253Updated last year
- Public RFDiffusionAA repoβ373Updated 8 months ago
- Google Colab Tutorials for IBM3202β257Updated 4 months ago
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and designβ549Updated 7 months ago
- Official Python client for accessing ChEMBL APIβ392Updated last month
- Interaction Fingerprints for protein-ligand complexes and moreβ396Updated last week
- ChatMolβ212Updated last week
- A Python API for the RCSB Protein Data Bank (PDB)β324Updated 7 months ago
- β256Updated this week
- β156Updated 3 years ago
- The Rosetta Bio-macromolecule modeling package.β230Updated this week