Pymol-Scripts / Pymol-script-repoLinks
Collected scripts for Pymol
β489Updated 2 weeks ago
Alternatives and similar repositories for Pymol-script-repo
Users that are interested in Pymol-script-repo are comparing it to the libraries listed below
Sorting:
- Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to π Adasme β¦β567Updated 2 months ago
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scienβ¦β372Updated 11 months ago
- Cloud-based molecular simulations for everyoneβ442Updated last month
- PDBFixer fixes problems in PDB filesβ571Updated 5 months ago
- A dependency-free cross-platform swiss army knife for PDB files.β424Updated last month
- gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.β271Updated last month
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and designβ599Updated last year
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.β341Updated 2 weeks ago
- AutoDock Vinaβ786Updated last month
- AutoDock for GPUs and other acceleratorsβ509Updated 6 months ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.β314Updated last year
- A Python API for the RCSB Protein Data Bank (PDB)β329Updated 2 months ago
- AlphaFold2 non-docker setupβ363Updated last year
- The Rosetta Bio-macromolecule modeling package.β310Updated this week
- A deep learning framework for molecular dockingβ757Updated last week
- Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting fβ¦β270Updated last year
- Google Colab Tutorials for IBM3202β263Updated 9 months ago
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithmβ351Updated last month
- Application to assign secondary structure to proteinsβ205Updated last week
- β286Updated this week
- Official Python client for accessing ChEMBL APIβ411Updated 6 months ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Modelsβ315Updated 2 weeks ago
- β338Updated last year
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure filesβ178Updated 5 years ago
- ColabFold on your local PCβ736Updated last month
- Public RFDiffusionAA repoβ426Updated last year
- Official repo of the modular BioExcel version of HADDOCKβ179Updated last week
- User friendly and accurate binder design pipelineβ634Updated last week
- A Python Package for Protein Dynamics Analysisβ493Updated last week
- Interaction Fingerprints for protein-ligand complexes and moreβ436Updated last month