Alternatives and similar repositories for zenodo-upload

Users that are interested in zenodo-upload are comparing it to the libraries listed below

• dvolgyes / zenodo_get
  Zenodo_get: Downloader for Zenodo records
  ☆163Updated 10 months ago
• snakemake / snakefmt
  The uncompromising Snakemake code formatter
  ☆165Updated last month
• GreenAlgorithms / GreenAlgorithms4HPC
  ☆61Updated 8 months ago
• amq92 / simple_slurm
  A simple Python wrapper for Slurm with flexibility in mind.
  ☆140Updated 3 months ago
• Snakemake-Profiles / slurm
  Cookiecutter for snakemake slurm profile
  ☆132Updated last year
• mkandes / galyleo
  A shell utility to help you launch Jupyter notebooks on high-performance computing systems in a simple, secure way.
  ☆36Updated last month
• troycomi / reportseff
  Tabular seff
  ☆81Updated 3 months ago
• jeffdaily / parasail-python
  Python bindings for the parasail C library.
  ☆100Updated 8 months ago
• jdblischak / smk-simple-slurm
  A simple Snakemake profile for Slurm without --cluster-config
  ☆154Updated 10 months ago
• NIH-HPC / Singularity-Tutorial
  How to use Singularity!
  ☆67Updated 4 years ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆92Updated 9 months ago
• asbschmidt / CUDASW4
  CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search
  ☆36Updated 6 months ago
• micans / mcl
  MCL, the Markov Cluster algorithm, also known as Markov Clustering, is a method and program for clustering weighted or simple networks, a…
  ☆98Updated last year
• crazyhottommy / The-world-of-faculty
  resources for faculty
  ☆217Updated 2 years ago
• snakemake-workflows / snakemake-workflow-template
  A template for standard compliant snakemake-workflows
  ☆95Updated last year
• LankyCyril / pyvenn
  Python module for plotting Venn diagrams of 2..6 sets
  ☆127Updated 2 years ago
• troycomi / snakemake-training
  Increasingly complete example bioinformatics workflow
  ☆18Updated 2 years ago
• refresh-bio / FAMSA
  Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
  ☆156Updated 7 months ago
• snakemake / snakemake-executor-plugin-slurm
  A Snakemake executor plugin for submitting jobs to a SLURM cluster
  ☆31Updated this week
• dialvarezs / alphafold
  Open source code for AlphaFold.
  ☆20Updated last year
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆225Updated 2 weeks ago
• levitsky / pyteomics
  Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…
  ☆128Updated this week
• not-a-feature / blosum
  A simple BLOSUM module for python3
  ☆18Updated last year
• open2c / bioframe
  Genomic interval operations on Pandas DataFrames
  ☆183Updated last week
• gchure / reproducible_research
  A template repository for how I structure my scientific research
  ☆96Updated last year
• jeffdaily / parasail
  Pairwise Sequence Alignment Library
  ☆254Updated last year
• McWilliamsCenter / slurm_jupyter
  Brief notes on how to run and access a jupyter notebook on a login node and a compute node using the SLURM cluster scheduler
  ☆57Updated 3 years ago
• asntech / postdoc-funding-schemes
  Funding schemes and travel grant opportunities for postdocs
  ☆50Updated 6 years ago
• althonos / rich-msa
  A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
  ☆84Updated 2 years ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆49Updated 8 months ago