GreenAlgorithms / GreenAlgorithms4HPC
☆61Updated 8 months ago
Alternatives and similar repositories for GreenAlgorithms4HPC
Users that are interested in GreenAlgorithms4HPC are comparing it to the libraries listed below
Sorting:
- The uncompromising Snakemake code formatter☆166Updated last month
- Tabular seff☆81Updated 4 months ago
- A template for standard compliant snakemake-workflows☆96Updated last week
- Cookiecutter for snakemake slurm profile☆132Updated last year
- Webinars&Tutorial on Containers on HPC and Cloud with Singularity☆27Updated 3 years ago
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆31Updated this week
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆16Updated last year
- Convert bioinformatics file formats to Zarr☆33Updated this week
- A Github action for running a Snakemake workflow☆58Updated last month
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆34Updated this week
- Introduction to Snakemake for Bioinformatics☆19Updated this week
- CATS: the Climate-Aware Task Scheduler 🐈 🐈⬛☆63Updated this week
- Turn an existing conda environment into a Singularity container☆80Updated 2 years ago
- Python wrapper around Nextflow.☆59Updated 3 weeks ago
- A statically generated catalog of available Snakemake workflows☆32Updated this week
- a minimal, scriptable genome browser for python☆51Updated 4 months ago
- ☆99Updated 2 months ago
- NBIS/Elixir course: Tools for Reproducible Research☆65Updated 3 weeks ago
- A tool for exploring large trees in the browser☆109Updated this week
- Snakemake workflow management system and CLI generation tool☆57Updated 2 weeks ago
- A simple Snakemake profile for Slurm without --cluster-config☆155Updated 10 months ago
- deploy a snakemake pipeline directly from version control (under development)☆24Updated 2 months ago
- Partial reimplementation of bcftools for VCF Zarr☆13Updated this week
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆30Updated 4 years ago
- Funding schemes and travel grant opportunities for postdocs☆51Updated 6 years ago
- MAPLE - a new approximate approach for maximum likelihood phylogenetics at short divergence.☆47Updated 2 weeks ago
- Cookiecutter profile for making a Snakemake-based bioinformatics tool, but without the fluff☆49Updated last year
- A translator from WDL to CWL v1.2☆27Updated 3 months ago
- Analyse MalariaGEN data from Python☆17Updated this week
- Testing building mulled containers for multi-requirement tools.☆72Updated this week