GreenAlgorithms / GreenAlgorithms4HPCLinks
☆69Updated last year
Alternatives and similar repositories for GreenAlgorithms4HPC
Users that are interested in GreenAlgorithms4HPC are comparing it to the libraries listed below
Sorting:
- Tabular seff☆88Updated 2 weeks ago
- The uncompromising Snakemake code formatter☆180Updated last month
- ☆113Updated 2 months ago
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆42Updated this week
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Updated 2 years ago
- A tool for exploring large trees in the browser☆117Updated this week
- A statically generated catalog of available Snakemake workflows☆35Updated last week
- A template for standard compliant snakemake-workflows☆116Updated 3 months ago
- Cookiecutter for snakemake slurm profile☆133Updated last year
- Apptainer in Docker!☆52Updated 11 months ago
- CATS: the Climate-Aware Task Scheduler 🐈 🐈⬛☆72Updated last month
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆41Updated this week
- A Github action for running a Snakemake workflow☆60Updated 4 months ago
- Collection template and associated materials for SARS-CoV-2 metadata☆35Updated 2 years ago
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆32Updated 4 years ago
- Ansible playbook for managing UseGalaxy.eu infrastructure.☆23Updated last week
- Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.☆127Updated 4 months ago
- Convert bioinformatics file formats to Zarr☆38Updated 5 months ago
- Turn an existing conda environment into a Singularity container☆81Updated 2 years ago
- Webinars&Tutorial on Containers on HPC and Cloud with Singularity☆27Updated 3 years ago
- Python library to simulate evolutionary sequence data☆80Updated 3 years ago
- baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development…☆112Updated last month
- DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm☆49Updated last month
- Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly☆180Updated this week
- Cookiecutter profile for making a Snakemake-based bioinformatics tool, but without the fluff☆51Updated 2 years ago
- Snakemake workflow management system and CLI generation tool☆61Updated last week
- A simple Snakemake profile for Slurm without --cluster-config☆162Updated last year
- MAPLE - a new approximate approach for maximum likelihood phylogenetics at short divergence.☆52Updated last week
- How to use Singularity!☆18Updated 5 years ago
- Course website "Docker and Singularity for reproducible research: getting started with containers"☆33Updated 2 weeks ago