imagej / example-legacy-plugin

Related projects ⓘ

Alternatives and complementary repositories for example-legacy-plugin

• tferr / Scripts
  Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
  ☆24Updated 2 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆37Updated 3 years ago
• VolkerH / Lattice_Lightsheet_Deskew_Deconv
  Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data
  ☆23Updated 4 years ago
• royerlab / daxi
  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
  ☆25Updated 2 months ago
• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆11Updated last year
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆15Updated this week
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 3 weeks ago
• SebastienTs / LOBSTER
  Little OBjects Segmentation and Tracking EnviRonment
  ☆9Updated 4 years ago
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆68Updated 2 weeks ago
• MontpellierRessourcesImagerie / MetroloJ_QC
  ☆12Updated last month
• DylanMuir / ReadImageJROI
  Matlab function to import ROIs from ImageJ
  ☆26Updated 4 years ago
• SebastienTs / MosaicExplorerJ
  An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets
  ☆12Updated 2 years ago
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆27Updated this week
• stardist / stardist-imagej
  StarDist plugin for ImageJ
  ☆27Updated 2 years ago
• imagej / imagej.github.io
  The ImageJ wiki
  ☆26Updated this week
• rharkes / Fast_Tiff_Write
  A fast multi-image tiff writer for Matlab
  ☆18Updated 5 months ago
• quokka79 / DavLUT
  Generates colormaps (lookup tables) for MATLAB & ImageJ
  ☆11Updated 6 years ago
• Ajaxels / MIB2
  Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…
  ☆27Updated last month
• tlambert03 / pycudasirecon
  CUDA-accelerated reconstruction for 3D-structured-illumination
  ☆9Updated 3 months ago
• imodpasteur / ZOLA-3D
  Zernike Optimized Localization Algorithm for 3D single molecule localizations
  ☆14Updated 2 years ago
• MicroscPSF / MicroscPSF-Py
  Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
  ☆38Updated 3 weeks ago
• sakoho81 / miplib
  A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
  ☆72Updated 3 years ago
• baigouy / EPySeg
  ☆22Updated 8 months ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆22Updated 3 years ago
• EliasNehme / Deep-STORM
  Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"
  ☆51Updated 4 years ago
• fiji / SPIM_Registration
  Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher
  ☆23Updated 2 months ago
• macronucleus / Chromagnon
  Image correction software for chromatic shifts in fluorescence microscopic images
  ☆21Updated last year
• flevet / SR-Tesseler
  ☆12Updated 4 years ago
• juglab / DenoiSeg
  Joint training of denoising and segmentation.
  ☆68Updated last year
• UU-cellbiology / DoM_Utrecht
  Detection of Molecules plugin for ImageJ, Utrecht University
  ☆14Updated 2 years ago