iSEE / iSEEu

Related projects: ⓘ

• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆36Updated 2 months ago
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆17Updated 2 months ago
• Bioconductor / IRanges
  Foundation of integer range manipulation in Bioconductor
  ☆21Updated 2 months ago
• lawremi / rtracklayer
  R interface to genome annotation files and the UCSC genome browser
  ☆27Updated 3 weeks ago
• Bioconductor / SummarizedExperiment
  SummarizedExperiment container
  ☆29Updated 2 months ago
• waldronlab / CNVWorkshop
  Workshop for CNV analysis with Bioconductor
  ☆17Updated 3 years ago
• csoneson / treeclimbR
  ☆19Updated last month
• epurdom / clusterExperiment
  R package of techniques for comparing clusterings of single-cell sequencing data
  ☆36Updated 4 months ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated last month
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆26Updated last year
• lianos / sparrow
  Take command of your set enrichment analyses.
  ☆20Updated this week
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆69Updated last week
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆17Updated 5 months ago
• tidyomics / tidyomicsBlog
  the manifesto, workshops and tutorials of the tidy transcriptomics
  ☆12Updated 4 months ago
• niaid / baseline
  Reproducible workflows for the data analysis of "Baseline" project
  ☆10Updated 4 years ago
• kstreet13 / scry
  Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).
  ☆19Updated 2 months ago
• markziemann / mitch
  An R package for multi-dimensional pathway enrichment analysis
  ☆16Updated 2 weeks ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• gosling-lang / grosling
  R interface to 'Gos'
  ☆35Updated last year
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆27Updated 3 years ago
• greenelab / onboarding
  Onboarding materials for the Greene Lab
  ☆31Updated last year
• Bioconductor / bioconductor_full
  [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages
  ☆25Updated last year
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆30Updated 3 weeks ago
• BaderLab / EnrichmentMapApp
  The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
  ☆31Updated 3 weeks ago
• seandavi / Orchestra
  workshop platform provider for running docker containers on kubernetes
  ☆19Updated 3 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆49Updated 4 months ago
• barkasn / fastSave
  Save and load your R sessions faster using parallel compression
  ☆23Updated 5 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated last week
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆19Updated 2 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆15Updated 5 years ago