ocramz / jupyter-docker-pymol
Container-based installation of pymol, with interaction through the browser via Jupyter notebook
☆18Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for jupyter-docker-pymol
- Control PyMOL sessions via IPython☆55Updated 2 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆15Updated 5 years ago
- Web cards/apps describing peptides☆23Updated last year
- Automated omics-scale protein modeling and simulation setup.☆52Updated 3 years ago
- ☆27Updated 6 months ago
- Make valid molecular graphs!☆22Updated 8 months ago
- Benchmarking common tasks on proteins in various languages and packages☆41Updated 3 years ago
- Use UCSF Chimera Python API in a standard interpreter☆58Updated 5 years ago
- PDBe Programming Interfaces information☆14Updated 6 years ago
- Printing text using protein structures☆12Updated 3 years ago
- docking visualization with py3dmol and streamlit☆23Updated 3 years ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆18Updated 8 years ago
- Access to data for workshops and extended tests of MDAnalysis.☆14Updated last month
- pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of str…☆26Updated 4 years ago
- Script to facilitate the making of horizontal scripts☆15Updated 5 months ago
- Functions to scrape GPCR data from the web.☆16Updated 3 years ago
- RCSB Python Database Utility Classes☆11Updated 3 weeks ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Updated 3 years ago
- Python package to manage protein structures and their annotations☆40Updated 8 months ago
- ☆32Updated 3 months ago
- ☆16Updated 5 years ago
- Source code and examples for AlphaFold Unmasked☆41Updated this week
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆28Updated 6 years ago
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆19Updated 5 months ago
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆25Updated 4 years ago
- Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows☆16Updated 6 years ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆22Updated 3 months ago
- A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2☆11Updated last year
- MMTSB Tool Set☆30Updated 2 weeks ago
- A collection of molecular modelling tools for UCSF Chimera☆17Updated 5 years ago