Alternatives and similar repositories for healthcare-text-annotation:

Users that are interested in healthcare-text-annotation are comparing it to the libraries listed below

• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆79Updated last week
• apache / ctakes
  Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.
  ☆62Updated last week
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆32Updated last year
• BD2KOnFHIR / NLP2FHIR
  NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications
  ☆60Updated 2 years ago
• blpercha / umls-to-graph
  Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.
  ☆41Updated 4 years ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆72Updated 2 years ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆64Updated 4 months ago
• CogStack / CogStack-Pipeline
  Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning
  ☆43Updated 2 years ago
• facebookresearch / Clinical-Trial-Parser
  Library for converting clinical trial eligibility criteria to a machine-readable format.
  ☆171Updated 3 years ago
• google / bulk_fhir_tools
  Examples, libraries, and tools for working with bulk FHIR data.
  ☆59Updated 3 months ago
• GoogleCloudPlatform / healthcare-nlp-visualizer-demo
  ☆22Updated 2 years ago
• google / meet-on-fhir
  Google Meet SMART on FHIR reference implementation
  ☆27Updated 4 years ago
• tmills / ctakes-docker
  ☆23Updated 5 years ago
• susom / tide
  ☆14Updated 4 months ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• Machine-Learning-for-Medical-Language / cnlp_transformers
  Transformers for Clinical NLP
  ☆23Updated 2 months ago
• dbmi-pitt / UMLS-Graph
  UMLS Graph database for semantic queries
  ☆20Updated 2 years ago
• google / cql
  An experimental Clinical Quality Language execution engine for analyzing FHIR healthcare data at scale.
  ☆76Updated last week
• GoogleCloudPlatform / healthcare-data-harmonization-dataflow
  ☆35Updated 10 months ago
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆30Updated 10 months ago
• dchang56 / snomed_kge
  ☆26Updated 4 years ago
• OHNLP / awesome-clinical-nlp
  ☆14Updated 4 years ago
• omoponfhir / omoponfhir-main
  Main OMOPonFHIR Settings
  ☆45Updated 3 years ago
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆60Updated 2 weeks ago
• CogStack / MedCATservice
  Running MedCAT as a RESTful web service
  ☆20Updated last month
• ncbo / umls2rdf
  These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…
  ☆86Updated 7 months ago
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆59Updated 10 months ago
• p2 / ClinicalTrialsNLP
  Classes for ClinicalTrials.gov related projects
  ☆47Updated 5 years ago
• IHTSDO / snomed-ui-examples
  SNOMED CT User Interface examples
  ☆25Updated last year
• Alvearie / quality-measure-and-cohort-service
  Service to evaluate quality measure and cohort specifications against a target patient data set.
  ☆11Updated 2 years ago