Alternatives and similar repositories for resolwe

Users that are interested in resolwe are comparing it to the libraries listed below

• galaxyproject / cloudlaunch
  Easily launch cloud applications.
  ☆42Updated 9 months ago
• caporaso-lab / cual-id
  A package for creating and managing sample identifiers in comparative -omics datasets.
  ☆24Updated 8 years ago
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆105Updated 2 years ago
• IQTLabs / squiggle
  📈 DNA Sequence Visualization for Humans
  ☆41Updated 4 years ago
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• bihealth / sodar-core-legacy
  LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.
  ☆15Updated 3 years ago
• smithijk / vcf_fdw_postgresql
  A PostgreSQL foreign data wrapper for VCF files.
  ☆18Updated 8 years ago
• solvebio / veppy
  Variant Effect Prediction for Python
  ☆15Updated 8 years ago
• raphael-group / gd3
  Javascript library for visualizing genomics data with D3.
  ☆19Updated 8 years ago
• schlegelp / catheat
  Plot categorical heatmaps with seaborn
  ☆18Updated 3 years ago
• Chris7 / pythomics
  A library to assist with a variety of -omic analyses. Included are tools for proteomics, transcriptomics, and genomics.
  ☆16Updated 2 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆14Updated last month
• common-workflow-lab / gxargparse
  Automated CWL and Galaxy XML generation for Python tools that use argparse and click
  ☆11Updated 6 years ago
• ga4gh / task-execution-schemas
  ☆91Updated 2 weeks ago
• prashnts / metaRNA
  Find target sites for the miRNAs in genomic sequences
  ☆18Updated 8 years ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆85Updated last month
• ENCODE-DCC / snovault
  The SnoVault general purpose hybrid object-relational database
  ☆16Updated last year
• LUMC / pytest-workflow
  Configure workflow/pipeline tests using yaml files.
  ☆69Updated last year
• Edinburgh-Genome-Foundry / sequenticon
  Generate identicons for DNA sequences with Python
  ☆38Updated 3 months ago
• counsyl / stor
  A cross-compatible CLI and Python API for accessing block and object storage
  ☆35Updated last year
• galaxyproject / cloudman
  Easily create and manage compute clusters on any Cloud.
  ☆37Updated 9 months ago
• EGA-archive / beacon2-ri-api
  Beacon v2 Reference Implementation (API)
  ☆17Updated 8 months ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last month
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆42Updated last week
• genialis / resolwe-bio
  Bioinformatics pipelines for Resolwe
  ☆17Updated 3 weeks ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 3 months ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• maxplanck-ie / parkour2
  Parkour2: Laboratory Information Management System 👩🏻‍🔬 🧬 👨🏽‍💻
  ☆30Updated this week
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago