frankkramer-lab / GERNERMED
GERNERMED is the first open neural NER model for medical entities designed for German data.
☆17Updated last year
Related projects ⓘ
Alternatives and complementary repositories for GERNERMED
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆73Updated last year
- GPTNERMED is a language model-generated, synthetic dataset and an open neural NER model for medical entities designed for German data.☆15Updated last year
- A Python library to de-identify medical records with state-of-the-art NLP methods.☆120Updated last year
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆23Updated 2 weeks ago
- BERT implementation for radiology full-text reports☆11Updated 4 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆83Updated 2 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆87Updated 3 months ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆57Updated last month
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated last year
- A simple python library for ICD-10-CM codes☆57Updated 8 months ago
- General tutorials for the setup and use of MedCAT.☆32Updated last month
- Winners of the SNOMED CT Entity Linking Challenge☆25Updated 7 months ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- Library for clinical NLP with spaCy.☆535Updated 3 weeks ago
- Deduce: de-identification method for Dutch medical text☆52Updated 2 weeks ago
- ☆18Updated 4 months ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆58Updated 2 years ago
- Predicting ICD Codes from Clinical Notes☆56Updated 4 years ago
- Weakly supervised medical named entity classification☆70Updated last year
- Medical Concept Annotation Tool☆452Updated this week
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated this week
- Open source clinical text de-identification☆112Updated 3 months ago
- ☆63Updated 3 years ago
- Recognize bio-medical entities from a text corpus☆117Updated last year
- Python Radiology Text Analysis System☆13Updated last year
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆59Updated 2 years ago
- ☆12Updated 4 years ago
- ☆204Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆29Updated 6 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆72Updated this week