frankkramer-lab / GPTNERMED
GPTNERMED is a language model-generated, synthetic dataset and an open neural NER model for medical entities designed for German data.
☆15Updated last year
Related projects ⓘ
Alternatives and complementary repositories for GPTNERMED
- Biomedical Data-to-Text Generation via Fine-Tuning Transformers☆29Updated 2 years ago
- Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?☆13Updated 3 years ago
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆16Updated 7 months ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- Self-verification for LLMs.☆62Updated last year
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆58Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆73Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆29Updated 6 months ago
- ☆65Updated 2 years ago
- ☆13Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆144Updated last year
- ☆49Updated 3 years ago
- ☆17Updated 7 months ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆83Updated 2 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 2 years ago
- Transformers for Clinical NLP☆21Updated this week
- ☆38Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆75Updated 2 years ago
- auto icd coding with prompt☆47Updated 6 months ago
- Preprocessing and analysis for training SNOMED-CT concept embeddings from CORD-19 corpus☆14Updated last year
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆56Updated last year
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆50Updated 2 years ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆24Updated last year
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆22Updated 4 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆24Updated last year
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)☆16Updated 2 years ago
- Sentence tokenizer for clinical/medical text.☆25Updated 5 months ago
- A new collection of 1.7k doctor-patient conversations and corresponding clinical notes/summaries.☆56Updated last year
- BioELECTRA☆51Updated 3 years ago