apache / ctakes
Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.
☆57Updated 2 weeks ago
Alternatives and similar repositories for ctakes:
Users that are interested in ctakes are comparing it to the libraries listed below
- A near real-time named-entity recognizer☆59Updated 8 months ago
- ☆14Updated 3 months ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Transformers for Clinical NLP☆23Updated 3 weeks ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated this week
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 3 months ago
- Winners of the SNOMED CT Entity Linking Challenge☆29Updated 10 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆64Updated 6 months ago
- General tutorials for the setup and use of MedCAT.☆36Updated last month
- A Serverless Text Annotation Tool for Corpus Development☆56Updated this week
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 3 months ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆40Updated 11 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆23Updated 3 years ago
- Represent SNOMED CT in a relational database☆82Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 9 months ago
- Running MedCAT as a RESTful web service☆19Updated last week
- ☆17Updated 10 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 4 months ago
- Robust de-identification of medical notes using transformer architectures☆50Updated 2 years ago
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated 2 months ago
- ☆22Updated last month
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆63Updated last month
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆26Updated last year
- A generator of synthetic psychiatric notes.☆16Updated 4 years ago
- init☆12Updated 2 months ago
- ☆42Updated 3 years ago
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆43Updated 2 years ago