jefferis / fiji-cmtk-guiLinks
Simple GUI frontend for CMTK image registration tools in Fiji/ImageJ
☆12Updated 7 years ago
Alternatives and similar repositories for fiji-cmtk-gui
Users that are interested in fiji-cmtk-gui are comparing it to the libraries listed below
Sorting:
- An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)☆12Updated 2 years ago
- ☆13Updated 8 months ago
- Modified version of MultiStackRegistration, for use from scripts.☆13Updated 3 years ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆33Updated 3 weeks ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 6 months ago
- A napari plugin for itk-elastix☆39Updated last week
- BIRDS plug-in on Fiji and attached jar package☆20Updated 4 years ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆45Updated 3 months ago
- Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher☆23Updated last year
- Noise Correction Algorithm for sCMOS cameras☆28Updated 5 years ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- List of QuPath scripts for alignment and stain deconvolution of whole-slide histology images☆26Updated 2 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 11 months ago
- The ImageJ wiki☆28Updated last week
- ImgLib2/BDV implementation of Stitching for large datasets☆77Updated last month
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- StarDist plugin for ImageJ☆30Updated 3 years ago
- ImageJ/Fiji plugin for consistent elastic registration of 2D images☆24Updated 3 years ago
- ImageJ plugins to run ilastik workflows☆25Updated 2 weeks ago
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Updated 4 years ago
- Script that registers Histology slices to volumetric image data☆11Updated 2 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 6 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 6 months ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated 5 months ago
- ImageJ macros and scripts written at the imaging facility MRI☆37Updated last week