The genTB project, the Django site, variant calling and prediciton pipeline, and mapping pipeline with hooks to two ravens
☆10Apr 6, 2026Updated 6 months ago
Alternatives and similar repositories for gentb-site
Users that are interested in gentb-site are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An nf-core (meta) pipeline for analysis of different members of Mycobacterium tuberculosis complex.☆14Updated this week
- ☆16Jun 30, 2021Updated 5 years ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 4 months ago
- MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumin…☆48Sep 8, 2025Updated last year
- A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research☆20Aug 10, 2026Updated 2 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Wide and Deep Neural Net for predicting TB resistance from genotypic data☆15Dec 9, 2019Updated 6 years ago
- Profiling NTM WGS data☆19Updated this week
- Sanger sequencing toolkit: chromatogram visualization, mutation calling, QC, base-calling, trimming, assembly and export (CLI + Python + …☆27Updated this week
- A MALDI Mass Spectrometry Bioinformatics Platform☆31Jun 10, 2026Updated 4 months ago
- A snakemake workflow for WGS-based tuberculosis transmission analysis☆20Dec 3, 2024Updated last year
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 6 years ago
- HuBMAP Data Portal front end☆13Oct 23, 2026Updated last week
- In silico multi-antigen sequence typing for Neisseria gonorrhoeae (NG-MAST)☆10Jun 17, 2026Updated 4 months ago
- Static website for the PH4AGE alliance☆14Oct 27, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Sep 17, 2018Updated 8 years ago
- Mycobacterial pipeline☆11Sep 11, 2025Updated last year
- ☆11Feb 16, 2021Updated 5 years ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Oct 15, 2020Updated 6 years ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆27Feb 13, 2025Updated last year
- An introductory course to eQTL analysis.☆10Jul 11, 2025Updated last year
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 3 years ago
- Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data☆142Oct 11, 2026Updated 2 weeks ago
- Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" …☆11Oct 17, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A script planner tool for Hollywood Animal☆24Updated this week
- Jean Gallier‘s Algebra, Topology, Differential Calculus, and Optimization Theory for Computer Science and Machine Learning Chinese versio…☆12Apr 16, 2020Updated 6 years ago
- ☆15Jan 24, 2024Updated 2 years ago
- R package for fast & exact (restricted) likelihood ratio tests for mixed and additive models☆12Jan 7, 2026Updated 9 months ago
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Mar 5, 2020Updated 6 years ago
- NGSTools☆16Mar 3, 2017Updated 9 years ago
- Single cell atlas of the hearts of patients with dilated cardiomyopathy☆13Sep 7, 2023Updated 3 years ago
- ☆16Feb 17, 2025Updated last year
- Solutions and codes for the book Problem Solving with Algorithms and Data Structures using Python☆12May 6, 2020Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- course about NGS data processing: genomics and transcriptomics☆33Feb 14, 2026Updated 8 months ago
- example ruffus pipeline☆18Sep 30, 2011Updated 15 years ago
- CutePeaks is a standalone Sanger trace viewer steered by a modern and user-friendly UI.☆48May 5, 2026Updated 5 months ago
- A pipeline for Bacterial Whole genome sequence data analysis☆15Jul 24, 2022Updated 4 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Nov 21, 2019Updated 6 years ago
- Infer transmission clusters from SNP and timing data☆17May 20, 2020Updated 6 years ago
- This is the webpage of the ESGEM-AMR Working Group☆16Oct 23, 2026Updated last week