Alternatives and similar repositories for simulateGP

Users that are interested in simulateGP are comparing it to the libraries listed below

• explodecomputer / random-metal
  Adding random effects model to the METAL software
  ☆13Updated 2 years ago
• jean997 / GWASBrewer
  Simulate GWAS data from an arbitrary DAG
  ☆11Updated last month
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated 6 months ago
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆13Updated 2 years ago
• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆18Updated 2 years ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• lcrawlab / i-LDSC
  Code and simulations using interaction-LD score regression
  ☆13Updated 11 months ago
• haotian-zhuang / findPC
  Automatic selection of number of principal components
  ☆16Updated 3 years ago
• gusevlab / hsq_ancestry_examples
  Toy simulations and analyses of heritability and genetic differences
  ☆11Updated 11 months ago
• LizaDarrous / PheWAS-cluster
  ☆20Updated 10 months ago
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year
• Nealelab / UKBB_ldsc
  Sample code for ldsc analyses in UKBB
  ☆30Updated 2 years ago
• Jmtorres138 / TACTICAL
  Tissue of ACTion scores for Investigating Complex trait-Associated Loci
  ☆13Updated 4 years ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆28Updated 8 months ago
• MRCIEU / GeneHackman
  Pipeline for genetic epidemiology projects at Univsersity of Bristol
  ☆14Updated 4 months ago
• Wittelab / pancancer_pleiotropy
  Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.
  ☆16Updated 4 years ago
• mancusolab / sushie
  Software to perform multi-ancestry SNP fine-mapping on molecular data
  ☆21Updated 8 months ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• yuanzhongshang / MRAID
  ☆16Updated 2 years ago
• GRealesM / RapidoPGS
  A rapido and lightweight method for PGS computation
  ☆14Updated 4 months ago
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• LaurenceHowe / SiblingGWAS
  Scripts for running a sibling GWAS
  ☆15Updated 3 years ago
• fritzbayer / snakemake-with-R
  Simple template for running snakemake with R
  ☆12Updated 2 years ago
• n-mounier / bGWAS
  R package to perform Bayesian Genome-Wide Association Studies
  ☆40Updated last year
• explodecomputer / tryx
  ☆10Updated 4 years ago
• RayDebashree / metaUSAT
  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…
  ☆20Updated 4 years ago
• tgirke / longevityTools
  Analysis tools for longevity research
  ☆19Updated 7 years ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆45Updated 3 months ago
• Nealelab / UKBB_ldsc_scripts
  Scripts used for generating Neale Lab UKB results
  ☆20Updated 2 years ago
• Yves-CHEN / DENTIST
  DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.
  ☆26Updated last year