NCBI-Hackathons / seqr
☆12Updated 2 years ago
Related projects: ⓘ
- A server for maintaining high-throughput sequencing QC data☆13Updated last year
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 8 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 6 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 11 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 5 years ago
- NExt generation Analysis Toolbox☆14Updated 8 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Graphical assessment of structrial variants using 10x genomics data☆10Updated 7 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 4 years ago
- ☆43Updated 8 years ago
- What's The Function of these genes?☆23Updated 7 years ago
- ☆12Updated 7 years ago
- A python script used to annotate genomic intervals.☆18Updated 4 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 2 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆68Updated last year
- Allele frequency filter app☆14Updated 2 years ago
- commandline manipulation of genomic variants and NGS reads☆19Updated 2 weeks ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 6 months ago
- ☆14Updated this week
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Benchmarking toolkit for variant calling☆47Updated 3 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 4 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Updated 7 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- This project has moved and will no longer be edited here. New link ->☆11Updated 7 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆31Updated 5 months ago
- Quick Read Quality Control☆20Updated last year
- Interactive table from gemini output☆10Updated 5 years ago
- GenoTypes Compressor☆15Updated 2 years ago
- RNAsik - more than just a pipeline☆13Updated 7 months ago
- ViraPipe is distributed Apache Spark based metagenome analytics pipeline for scalable detection of pathogens from NGS data☆16Updated 6 years ago