dxsbiocc / WorkflowLinks
The snakemake analysis workflow for bioinformatics
☆26Updated last year
Alternatives and similar repositories for Workflow
Users that are interested in Workflow are comparing it to the libraries listed below
Sorting:
- Pipeline for Somatic Variant Calling with WES and WGS data☆24Updated last year
- Shell wrappers for bulk and 10X single cell NGS pipelines, RNAseq, ChIPseq, ATACseq, CUT&RUN/TAG, WGS, etc.☆16Updated 2 weeks ago
- ☆51Updated 7 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last month
- HiC uniform processing pipeline☆62Updated 2 years ago
- ☆32Updated 2 years ago
- release version☆58Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆45Updated 8 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- Go to☆35Updated this week
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 6 months ago
- ☆60Updated 6 months ago
- bioinformatic pipeline for GLORI☆22Updated last year
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- ☆27Updated 5 years ago
- Tutorial Website☆63Updated 5 years ago
- ☆64Updated 4 months ago
- Quantitation and visualization of differential alternative splicing events☆11Updated 2 years ago
- Quantification of transposable element expression using RNA-seq☆82Updated 2 years ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆53Updated 2 years ago
- Estimate locus specific human LINE-1 expression.☆39Updated 3 weeks ago
- A list of alternative splicing analysis resources☆47Updated 10 months ago
- Allele-specific alignment sorting☆61Updated 3 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27Updated 2 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- RNA-seq analysis☆29Updated 4 years ago
- ATAC-seq processing pipeline☆34Updated 3 years ago