Code for Nanodesigner: resolving the complex-CDR interdependency with iterative refinement paper
☆16Aug 17, 2025Updated 11 months ago
Alternatives and similar repositories for NanoDesigner
Users that are interested in NanoDesigner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆16Oct 17, 2024Updated last year
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆47Dec 26, 2024Updated last year
- nanobody melting temperature prediction using protein embeddings☆13Feb 24, 2025Updated last year
- Polyreactivity Website☆23Jun 26, 2023Updated 3 years ago
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Therapeutic Nanobody Profiler☆38Nov 11, 2025Updated 8 months ago
- ☆54Apr 1, 2025Updated last year
- ☆12Jun 16, 2023Updated 3 years ago
- PPI version of Pythia☆35Jun 13, 2026Updated last month
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆54Jun 22, 2026Updated 3 weeks ago
- ☆51Aug 21, 2023Updated 2 years ago
- Code for humanization of antibody and nanobody☆89Aug 28, 2025Updated 10 months ago
- Official Implementation of IgGM☆214May 28, 2026Updated last month
- Humanness of de-novo designed proteins☆46May 19, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆141Apr 27, 2026Updated 2 months ago
- Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model☆16Jun 4, 2024Updated 2 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆27Feb 23, 2026Updated 4 months ago
- ☆32Jun 16, 2025Updated last year
- ☆16Mar 19, 2026Updated 4 months ago
- Antibody-Specific Epitope Mapping☆19Sep 10, 2025Updated 10 months ago
- Antibody-specific masked language model☆79Mar 5, 2026Updated 4 months ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- Antibody structure prediction☆37Dec 16, 2025Updated 7 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆142Aug 8, 2024Updated last year
- Tokenizing Loops of Antibodies☆35Nov 23, 2025Updated 7 months ago
- a lightweight distogram-prediction model trained via contrastive learning☆15May 3, 2026Updated 2 months ago
- Ginkgo Antibody Developability 2025 Competition Repo☆34Nov 25, 2025Updated 7 months ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆22Feb 23, 2026Updated 4 months ago
- Code for NeurIPS 2023 paper "AVIDa-hIL6: A Large-Scale VHH Dataset Produced from an Immunized Alpaca for Predicting Antigen-Antibody Inte…☆21Nov 19, 2024Updated last year
- Repository containing pipelines developed for the SNAC-DB (Structural NANOBODY® VHH and Antibody Complex Database). SNAC-DB is ML-ready c…☆32Jun 8, 2026Updated last month
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆23Aug 8, 2024Updated last year
- Physical energy function for protein sequence design☆42May 6, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Dec 10, 2025Updated 7 months ago
- ☆23Jul 4, 2021Updated 5 years ago
- ☆133Sep 5, 2022Updated 3 years ago
- ☆110Apr 1, 2023Updated 3 years ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆100Jun 11, 2025Updated last year
- Conditionally Site-Independent Neural Evolution of Antibody Sequences (ICML '26)☆24May 9, 2026Updated 2 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year