krejciadam / hammockLinks
Cluster up to millions of peptide sequences on shared sequence motifs.
☆12Updated 6 years ago
Alternatives and similar repositories for hammock
Users that are interested in hammock are comparing it to the libraries listed below
Sorting:
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated last week
- Python package and command line tool for epitope prediction☆51Updated 11 months ago
- Evolutionary conservation estimation of residues or nucleotides☆45Updated 3 years ago
- ☆30Updated 2 months ago
- PSIPRED Protein Secondary Structure Predictor☆57Updated 2 weeks ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 4 months ago
- A Python platform for Structural Bioinformatics☆57Updated 4 months ago
- Centroid RNA package☆19Updated 4 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 7 months ago
- Singularity recipe for AlphaFold☆36Updated 8 months ago
- A platform to do RNA science☆27Updated 4 years ago
- a collection of colabs useful for molecular biology☆30Updated last year
- Glycan Analysis and Glycoinformatics Library for Python☆35Updated last month
- Comprehensive Python client for the Uniprot REST API☆50Updated last month
- Mutation effects predicted from sequence co-variation☆66Updated 7 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated this week
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆24Updated 5 months ago
- ☆25Updated last year
- Gaussian process models for optimizing channelrhodopsin properties.☆12Updated 5 years ago
- A Python package for mapping sequence aligned data onto protein structures☆35Updated 4 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆88Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- Peptide library design☆23Updated 4 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- Package for processing and analyzing glycans and their role in biology.☆69Updated this week
- Evolutionary velocity with protein language models☆93Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated 9 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆55Updated 3 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆89Updated last year
- Multi-Species Codon Optimization Engine☆27Updated last year