๐ Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Knowledge Graph Embedding Models Under a Unified Framework" (http://arxiv.org/abs/2006.13365)
โ36Apr 19, 2022Updated 4 years ago
Alternatives and similar repositories for benchmarking
Users that are interested in benchmarking are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ๐ A review of KGEM packages and frameworks at https://pykeen.github.io/kgem-software-review.โ12Jun 24, 2024Updated last year
- ๐ Generation and Applications of Knowledge Graphs in Systems and Networks Biologyโ33Dec 16, 2019Updated 6 years ago
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ76Jun 4, 2026Updated last week
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"โ20Jan 17, 2024Updated 2 years ago
- ๐ถ๏ธ An ecosystem in Python for working with the Biological Expression Language (BEL)โ138Jun 26, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways โข AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)โ21Nov 3, 2021Updated 4 years ago
- "Inductive Entity Representations from Text via Link Prediction" @ The Web Conference 2021โ64Jun 12, 2023Updated 3 years ago
- Knowledge Graph Embeddings learned from the structure and literals of knowledge graphsโ44Jun 21, 2022Updated 3 years ago
- This repository contains code and dataset splits for the paper "Classification by Attention: Scene Graph Classification with Prior Knowleโฆโ16May 27, 2022Updated 4 years ago
- PyTorch code of โOut-of-Sample Representation Learning for Multi-Relational Graphsโ (EMNLP 2020)โ10Oct 2, 2020Updated 5 years ago
- ๐ Lookup classes and instantiate them with styleโ68Apr 13, 2026Updated 2 months ago
- Compositional and Parameter-Efficient Representations for Large Knowledge Graphs (ICLR'22)โ144Feb 2, 2022Updated 4 years ago
- PyG re-implementation of Neural Bellman-Ford Networks (NeurIPS 2021)โ76Aug 25, 2022Updated 3 years ago
- โ19Sep 14, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer โข AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Efficient, Simple, and Automated Negative Sampling for Knowledge Graph Embedding. VLDBJ 2020.โ12Nov 9, 2020Updated 5 years ago
- โ15May 21, 2026Updated 3 weeks ago
- The Gene Ontology Helpdeskโ16Mar 25, 2026Updated 2 months ago
- โ14Jun 14, 2022Updated 3 years ago
- โ13Apr 23, 2025Updated last year
- Y. Zhang, Q. Yao, J. Kwok. Bilinear Scoring Function Search for Knowledge Graph Learning. TPAMI 2022โ68Dec 1, 2023Updated 2 years ago
- Simple yet SoTA Knowledge Graph Embeddings.โ111Jun 6, 2022Updated 4 years ago
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ144Updated this week
- An app and library for building, conversion, and validation of GA4GH Phenopackets.โ17Mar 2, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways โข AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"โ13Apr 2, 2023Updated 3 years ago
- Web app and CLI tools for working with biomedical terminologies.โ11Mar 20, 2026Updated 2 months ago
- CoDEx: A set of knowledge graph Completion Datasets Extracted from Wikidata and Wikipediaโ176Aug 1, 2024Updated last year
- (Personalized) Page-Rank computation using PyTorchโ93Nov 30, 2022Updated 3 years ago
- The repository contains the data and the codes for the manuscript "Relational graph convolutional networks for predicting blood-brain barโฆโ15May 21, 2025Updated last year
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.โ161May 3, 2024Updated 2 years ago
- Network Embedding All the Thingsโ19Oct 4, 2022Updated 3 years ago
- Using pretrained language models for biomedical knowledge graph completion.โ47Oct 7, 2021Updated 4 years ago
- โ27Dec 15, 2025Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a official repository for MExDโ20Oct 27, 2025Updated 7 months ago
- This is a code repository for paper OODformer: Out-Of-Distribution Detection Transformerโ40Oct 20, 2021Updated 4 years ago
- The demo for "Sawtooth Factorial Topic Embeddings Guided Gamma Belief Network" in ICML 2021โ10Aug 17, 2021Updated 4 years ago
- Testing of Neural Topic Modeling for Japanese articlesโ13Jul 24, 2019Updated 6 years ago
- Locally corrected Nystrรถm (LCN), as proposed in "Scalable Optimal Transport in High Dimensions for Graph Distances, Embedding Alignment, โฆโ19Apr 26, 2023Updated 3 years ago
- Vaccine Ontologyโ17Updated this week
- Hardware-agnostic Framework for Large-scale Knowledge Graph Embeddingsโ67Updated this week