chop-dbhi / drug_word_embeddingsLinks
development and intrinsic evaluation of drug related word embeddings using PubMed abstracts and DrugBank
☆14Updated 8 years ago
Alternatives and similar repositories for drug_word_embeddings
Users that are interested in drug_word_embeddings are comparing it to the libraries listed below
Sorting:
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 5 years ago
- ☆122Updated 7 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- ☆232Updated 8 years ago
- Repository for student projects within biomedical text mining from Lund University☆56Updated 2 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated last year
- Named Entity Recognition for biomedical entities☆48Updated 2 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆29Updated 3 years ago
- ☆75Updated last year
- ☆42Updated 5 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated last year
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Tool that converts between BioC XML files and BioC JSON files☆18Updated 8 years ago
- ☆12Updated 5 years ago
- ☆152Updated last year
- PhenoTagger☆64Updated last year
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Updated 3 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- NLP framework in python for entity recognition and relationship extraction☆115Updated 2 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 6 years ago
- Public release of the DeepPhe analytic software☆30Updated 3 months ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- Turku Event Extraction System☆146Updated 6 years ago
- BioBert Pytorch☆115Updated 2 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆158Updated 2 years ago
- ☆22Updated 2 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago