chop-dbhi / drug_word_embeddingsLinks
development and intrinsic evaluation of drug related word embeddings using PubMed abstracts and DrugBank
☆14Updated 8 years ago
Alternatives and similar repositories for drug_word_embeddings
Users that are interested in drug_word_embeddings are comparing it to the libraries listed below
Sorting:
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 10 months ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- ☆73Updated last year
- Retrieve and process PubTator annotations☆44Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Detecting drug-drug interaction (DDI) has become a vital part of public health safety. This project is an implementation of NLP based app…☆17Updated 7 years ago
- Python library for work with BioCreative files☆13Updated 7 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- ☆122Updated 7 years ago
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- ☆12Updated 4 years ago
- Repository for student projects within biomedical text mining from Lund University☆54Updated 2 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago
- ☆91Updated 5 years ago
- ☆35Updated 4 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- ☆16Updated 7 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Updated 2 years ago
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year