CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.
☆116Oct 26, 2026Updated this week
Alternatives and similar repositories for CellExplorer
Users that are interested in CellExplorer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for internal lab sharing - polishing has started but is by no means complete☆140Oct 1, 2026Updated 3 weeks ago
- This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linea…☆25Dec 5, 2025Updated 10 months ago
- Fast spike sorting with drift correction☆635Sep 25, 2026Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆82Aug 12, 2026Updated 2 months ago
- UltraMegaSort2000 - Spike sorting and quality metrics for extracellular spike data☆13Aug 20, 2014Updated 12 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Plugins for Phy2☆20May 13, 2025Updated last year
- Metrics for spike sorting validation/quality control☆15Sep 8, 2021Updated 5 years ago
- A Python-based module for creating flexible and robust spike sorting pipelines.☆869Updated this week
- A spike raster plot from spike time stamps with optional trial and group data.☆12Nov 15, 2024Updated last year
- Python code for interacting with the Open Ephys GUI☆48Nov 7, 2025Updated 11 months ago
- Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.☆255Oct 19, 2026Updated last week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆157Aug 19, 2026Updated 2 months ago
- Lightweight electrophysiological data analysis library☆16Updated this week
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆435Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Elephant is the Electrophysiology Analysis Toolkit☆244Oct 21, 2026Updated last week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆131Aug 18, 2024Updated 2 years ago
- A Matlab interface for reading and writing NWB files☆62Oct 20, 2026Updated last week
- PYthon Neural Analysis Package☆382Updated this week
- This is a tutorial for key data analysis steps used by neuroscientists - filtering, spike extraction, PCA, clustering, and spectral analy…☆29May 25, 2023Updated 3 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆72Nov 7, 2023Updated 2 years ago
- AIND pipeline for processing extracellular electrophysiology data☆43Updated this week
- MATLAB code for local field potential analysis☆21Aug 5, 2022Updated 4 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆82Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Web app for viewing results of ephys spike sorting☆29Sep 4, 2025Updated last year
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆121Oct 21, 2026Updated last week
- Revealing neural correlates of behavior without behavioral measurements☆18Nov 18, 2019Updated 6 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Oct 14, 2026Updated 2 weeks ago
- A fast and unsupervised algorithm for spike detection and sorting using wavelets and super-paramagnetic clustering☆142Nov 30, 2022Updated 3 years ago
- Matlab code for interacting with the Open Ephys GUI☆21Sep 25, 2024Updated 2 years ago
- A Python API for working with Neurodata stored in the NWB Format☆225Oct 20, 2026Updated last week
- methods for detecting/quantifying reactivation and replay in neural data☆12May 8, 2021Updated 5 years ago
- SpikeForest -- spike sorting analysis for website -- version 2☆36Nov 8, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆15Aug 27, 2021Updated 5 years ago
- GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)☆37Sep 21, 2022Updated 4 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆39Aug 22, 2025Updated last year
- CNN-ripple is a 1D convolutional neural network (CNN) operating over high-density LFP recordings to detect hippocampal SWR both offline a…☆18Nov 15, 2022Updated 3 years ago
- cortex lab code for electrophysiology☆84Feb 5, 2024Updated 2 years ago
- Tools for use with the Macaque Face 3D stimulus set - a parameterized digital 3D model of the Rhesus macaque face☆11Apr 27, 2022Updated 4 years ago
- Python package to handle probe layout, geometry and wiring to device.☆88Updated this week