JorritMontijn / UniversalProbeFinderLinks
A multi-species, multi-ephys format histology processing and probe alignment pipeline
☆13Updated last year
Alternatives and similar repositories for UniversalProbeFinder
Users that are interested in UniversalProbeFinder are comparing it to the libraries listed below
Sorting:
- pynapple collaborative data analysis (high level python scripts)☆38Updated last month
- ☆23Updated last year
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆14Updated 4 years ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated last week
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- IBL core shared libraries☆66Updated last week
- Plugins for Phy2☆19Updated 8 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated last week
- ☆18Updated last month
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆43Updated 10 months ago
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆66Updated 3 weeks ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 3 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆21Updated 2 weeks ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 6 months ago
- Open Neurophysiology Environment☆21Updated 3 weeks ago
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Metrics for spike sorting validation/quality control☆15Updated 4 years ago
- Python package to handle probe layout, geometry and wiring to device.☆77Updated this week
- ☆24Updated 2 weeks ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆32Updated 2 weeks ago
- A Matlab interface for reading and writing NWB files☆57Updated this week
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month