choosehappy / SnippetsLinks
Pieces of code likely to be useful as part of larger projects
☆21Updated 8 months ago
Alternatives and similar repositories for Snippets
Users that are interested in Snippets are comparing it to the libraries listed below
Sorting:
- SlideRunner is a tool for massive cell annotations in whole slide images☆80Updated 6 months ago
- A High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology☆42Updated 3 years ago
- An open-source digital pathology based rapid image annotation tool☆90Updated this week
- An implementation of Unet for pytorch designed for digital pathology segmentation☆127Updated 3 years ago
- Delete the label from a whole-slide image☆65Updated 4 years ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆80Updated 3 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆133Updated this week
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆32Updated 3 years ago
- This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei…☆26Updated 3 years ago
- Full package for applying deep learning to virtual slides.☆72Updated 7 years ago
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆164Updated last year
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- ☆73Updated 2 weeks ago
- ☆24Updated 2 years ago
- PAthological QUpath Obsession - QuPath and Python conversations☆130Updated 5 months ago
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆22Updated 4 years ago
- a toolbox for manipulation of digital pathology slides and annotations☆19Updated 5 years ago
- FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytopla…☆30Updated 4 years ago
- ☆32Updated last year
- A Girder plugin for pathology image annotations and analysis.☆78Updated 2 weeks ago
- A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge☆209Updated 6 years ago
- A Python library for deep learning on whole-slide images☆52Updated 4 years ago
- Handling whole-slide images with region-level annotations.☆10Updated 7 years ago
- ☆21Updated last month
- A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.☆11Updated 7 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated 2 years ago
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Updated 3 years ago
- A tool for training machine-learning models with whole-slide imaging datasets☆26Updated 2 years ago
- Survival Convolutional Neural Networks☆67Updated 2 years ago