Pieces of code likely to be useful as part of larger projects
☆21Feb 24, 2026Updated last month
Alternatives and similar repositories for Snippets
Users that are interested in Snippets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open-source digital pathology based rapid image annotation tool☆90Feb 26, 2026Updated last month
- A tool for training machine-learning models with whole-slide imaging datasets☆26Dec 27, 2023Updated 2 years ago
- Generation of synthetic artefacts / digital pathology☆15Jun 22, 2021Updated 4 years ago
- ☆11Jul 8, 2024Updated last year
- A Toolset for Chromosome X-Wide Association Studies☆12May 1, 2018Updated 7 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- cEll tyPe enrIChment☆16Dec 11, 2022Updated 3 years ago
- slideToolkit: a free toolset for analyzing full size virtual histology slides☆11May 22, 2024Updated last year
- miRTrace☆11Jun 14, 2023Updated 2 years ago
- Diagnostic functions to assess the quality of cell type annotations in single-cell RNA sequencing data☆13Jan 25, 2026Updated 2 months ago
- An open source online platform for collaborative image labeling of almost everything☆62Updated this week
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆32Feb 18, 2022Updated 4 years ago
- pipeline for the analysis of small RNA data☆14Jun 24, 2019Updated 6 years ago
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆14Oct 27, 2023Updated 2 years ago
- Finds DAMEs - Differential Allelicly MEthylated regions☆10Jul 29, 2025Updated 8 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Configs and descriptions of circos plots created on FUMA web application☆15Dec 10, 2017Updated 8 years ago
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- A Transcriptomics-Proteomics Integration Pipeline☆18Apr 11, 2024Updated last year
- A pan-cancer analysis of the microbiome in metastatic cancer (Battaglia et. al, Cell, 2024)☆14Apr 9, 2024Updated last year
- ☆77Dec 16, 2024Updated last year
- Experimental repo for Odelia project based on HPE platform. This repo contains multiple models for histopathology and radiology training.☆14Feb 20, 2026Updated last month
- A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.☆11Jun 22, 2018Updated 7 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆15Mar 31, 2022Updated 3 years ago
- A end-to-end scRNA-seq analysis pipeline for cross-group comparison☆19May 18, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- An implementation of Unet for pytorch designed for digital pathology segmentation☆127Aug 23, 2022Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 3 years ago
- End-to-end example of training, exporting and deploying a fastai model to a native iOS app☆11Mar 2, 2023Updated 3 years ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Feb 13, 2026Updated last month
- An R package for generating comparative regional association plots☆18Sep 30, 2025Updated 5 months ago
- qstat wrapper☆17Nov 25, 2020Updated 5 years ago
- Easily read and write ome-tiff images in python☆28May 6, 2024Updated last year
- ☆13Nov 26, 2018Updated 7 years ago
- Estimate microRNA activity in single cells☆13May 4, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.☆20Jan 19, 2024Updated 2 years ago
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in c…☆17Sep 26, 2021Updated 4 years ago
- A model context protocol (MCP) server for the EBI Ontology Lookup Service (OLS)☆23Jul 16, 2025Updated 8 months ago
- A set of software tools to facilitate GWAS analysis☆20Aug 29, 2023Updated 2 years ago
- fast bgen parser for python☆16Updated this week
- A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set☆18Feb 12, 2016Updated 10 years ago
- Python modules to work with large multiresolution images.☆219Updated this week