Alternatives and similar repositories for Clinical-Text-Mining:

Users that are interested in Clinical-Text-Mining are comparing it to the libraries listed below

• clinicalml / ML-tools
  Miscellaneous tools for clinical ML
  ☆29Updated 7 years ago
• jasonost / clinicaltrials
  ☆13Updated 9 years ago
• p2 / ClinicalTrialsNLP
  Classes for ClinicalTrials.gov related projects
  ☆47Updated 5 years ago
• Tony-Hao / Valx
  a Python tool to extract and structure numeric lab test comparison statements from text
  ☆22Updated last year
• BMDSoftware / neji
  Flexible and powerful platform for biomedical information extraction from text
  ☆39Updated 7 years ago
• OHDSI / KnowledgeBase
  Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…
  ☆55Updated 6 years ago
• healthnlp / examples
  Health NLP Examples
  ☆88Updated 6 years ago
• nlpie / biomedicus2
  Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.
  ☆44Updated last year
• giuseppetotaro / ctakes-clinical-pipeline
  Clinical Pipeline Engine using Apache cTAKES
  ☆24Updated 9 years ago
• dirkweissenborn / ctakes-server
  A simple REST-server around ctakes clinical pipeline.
  ☆30Updated 8 years ago
• Tian312 / EliIE
  An information extraction system for free-text eligibility criteria
  ☆36Updated 6 years ago
• DeepPhe / DeepPhe-Release
  Public release of the DeepPhe analytic software
  ☆30Updated 2 years ago
• hetio / medline
  Computing term cooccurrence in MEDLINE
  ☆17Updated 3 years ago
• opentargets-archive / library-beam
  Open Targets Library ETL Pipeline | Apache Beam
  ☆16Updated 3 years ago
• hscells / cui2vec
  Utility for cui2vec in Go
  ☆11Updated last year
• ncbo / ncbo_rest_sample_code
  Sample code that demonstrates the use of the NCBO REST services
  ☆42Updated last year
• abhyudaynj / birnn-bionlp
  Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.
  ☆25Updated 8 years ago
• natoromano / deep-patient
  Deep patient implementation
  ☆46Updated 7 years ago
• chapmanbe / pyConTextNLP
  ☆98Updated last year
• chb / py-umls
  Basic Python 3 tools to interact with UMLS lexica
  ☆124Updated 6 years ago
• EpistasisLab / MIMIC_trajectories
  ☆30Updated 7 years ago
• ropensci-archive / cleanEHR
  ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical…
  ☆55Updated 2 years ago
• HazyResearch / ddbiolib
  DeepDive Biomedical Tools
  ☆14Updated 7 years ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆32Updated last year
• chop-dbhi / data-models
  Collection of various biomedical data models in parseable formats.
  ☆28Updated 2 weeks ago
• clinicalml / deepDiagnosis
  A torch package for learning diagnosis models from temporal patient data.
  ☆113Updated 7 years ago
• dbeanm / UMLS-Neo4j
  Load all concepts and relationships from UMLS into a Neo4j database
  ☆11Updated 4 years ago
• clinicalml / HealthKnowledgeGraph
  Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
  ☆100Updated 4 years ago
• kenpachiii / cTAKES-Python-API
  cTAKES Python API interface for the Default Clinical Pipeline
  ☆15Updated 6 years ago
• CrowdTruth / Medical-Relation-Extraction
  Crowdsourced ground truth for medical relation extraction.
  ☆69Updated 5 years ago