tjhladish / EpiFireLinks
A fast C++ API for simulating the spread of epidemics on contact networks.
☆41Updated last year
Alternatives and similar repositories for EpiFire
Users that are interested in EpiFire are comparing it to the libraries listed below
Sorting:
- ODE modelling in Python☆30Updated last month
- Text project for theoretical primer on human evolutionary ecology☆35Updated 2 years ago
- Simulation-based Inference for Epidemiological Dynamics☆25Updated 4 months ago
- Some teaching material and other educational resources☆41Updated 3 weeks ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- R package for statistical inference using partially observed Markov processes☆118Updated last week
- Draft introduction to probability and inference aimed at the Stan manual.☆85Updated 9 years ago
- The Public FRED Repository☆78Updated last year
- HTTP interface to Stan, a package for Bayesian inference.☆41Updated 7 months ago
- ☆13Updated 4 years ago
- Everything you've never dreamed about measuring on ecological networks.☆69Updated 2 years ago
- 'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)☆66Updated 4 years ago
- Projection predictive variable selection☆112Updated last week
- Introduction to Scientific Computing 🦊☆124Updated last year
- CmdStan, the command line interface to Stan☆229Updated last week
- Bayesian state-space modelling on high-performance hardware, including multicore, GPUs and distributed clusters.☆101Updated 2 years ago
- Case studies in applied and computational statistics.☆38Updated 4 months ago
- outbreaks: an R package compiling disease outbreak data☆52Updated 2 years ago
- ☆89Updated 5 years ago
- Implementation of B-Splines in Stan☆51Updated 7 years ago
- Study on estimating incubation period distribution and other epidemiological parameters for a novel coronavirus disease (COVID-19)☆14Updated 5 years ago
- Disciplined Convex Programming in R using Convex.jl.☆14Updated 6 years ago
- State space models (dynamic linear models, hidden Markov models) implemented in Stan.☆47Updated 7 years ago
- Code to test Rt estimates against synthetic data☆18Updated 4 years ago
- OpenABM-Covid19: an agent-based model for modelling the spread of SARS-CoV-2 (coronavirus) and control interventions for the Covid-19 epi…☆122Updated 2 years ago
- R package for "Epidemics: Models and data using R"☆55Updated 3 years ago
- Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…☆71Updated 2 years ago
- A cookbook of epidemiological models☆13Updated 6 years ago
- Multi-core BUGS for fast Bayesian inference of large hierarchical models☆36Updated 4 years ago
- Notebooks on fitting mixed-effects models in Julia☆24Updated 7 years ago