Alternatives and similar repositories for EpiFire:

Users that are interested in EpiFire are comparing it to the libraries listed below

• kingaa / sbied
  Simulation-based Inference for Epidemiological Dynamics
  ☆25Updated 9 months ago
• jgabry / bayes-vis-paper
  'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)
  ☆64Updated 4 years ago
• kingaa / short-course
  Model-based Inference in Ecology and Epidemiology
  ☆5Updated 4 years ago
• kforeman / PyMB
  Python Model Builder - fit statistical models using algorithmic differentiation
  ☆12Updated 5 years ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• bob-carpenter / case-studies
  Case studies in applied and computational statistics.
  ☆36Updated 3 months ago
• LarremoreLab / covid_serological_sampling
  ☆13Updated 3 years ago
• rmcelreath / elements_evolutionary_anthropology
  Text project for theoretical primer on human evolutionary ecology
  ☆33Updated 2 years ago
• objornstad / epimdr
  R package for "Epidemics: Models and data using R"
  ☆56Updated 2 years ago
• MJomaba / flu-evidence-synthesis
  Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques
  ☆20Updated 2 years ago
• stan-dev / docs
  Documentation for the Stan language and CmdStan
  ☆38Updated this week
• milkha / Splines_in_Stan
  Implementation of B-Splines in Stan
  ☆52Updated 7 years ago
• cobeylab / Rt_estimation
  Code to test Rt estimates against synthetic data
  ☆17Updated 4 years ago
• cbreto / panelPomp
  R package for statistical inference using panelPOMPs (panel Partially Observed Markov Processes)
  ☆11Updated 5 months ago
• reconverse / outbreaks
  outbreaks: an R package compiling disease outbreak data
  ☆51Updated 2 years ago
• cdcepi / FluSight-forecasts
  FluSight Forecast Submissions
  ☆18Updated 9 months ago
• seabbs / idmodelr
  Infectious disease model library and utilities
  ☆15Updated 2 years ago
• jgabry / bayes-workflow-book
  Source files for the book "Bayesian Workflow Using Stan"
  ☆93Updated 3 years ago
• stan-dev / projpred
  Projection predictive variable selection
  ☆111Updated last week
• sshpa / bayesvl
  BayesVL package for Bayesian statistical analyses in R
  ☆20Updated 2 years ago
• jtimonen / lgpr
  R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…
  ☆25Updated 5 months ago
• omaclaren / open-learning-material
  Some teaching material and other educational resources
  ☆41Updated 4 months ago
• flaxter / us2016
  Understanding the 2016 US Presidential Election using ecological inference and distribution regression with census microdata
  ☆16Updated 7 years ago
• emilyriederer / conf-speaker-experience
  A list of "good practices" for creating a good environment for conference speakers. Based on my own experience as a speaker but prepared …
  ☆30Updated 5 years ago
• rgiordan / StanSensitivity
  Tools for automatically generating local sensitivity measures in Stan.
  ☆35Updated 4 years ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 2 months ago
• quentingronau / bridgesampling
  R package for bridge sampling
  ☆32Updated 9 months ago
• bob-carpenter / diagnostic-testing
  statistical models to analyze diagnostic tests
  ☆15Updated 4 years ago
• kingaa / pomp
  R package for statistical inference using partially observed Markov processes
  ☆114Updated last week
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 2 years ago