R package for statistical inference of spatiotemporal partially observed Markov processes
☆12Dec 21, 2024Updated last year
Alternatives and similar repositories for spatPomp
Users that are interested in spatPomp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for statistical inference using panelPOMPs (panel Partially Observed Markov Processes)☆10Sep 10, 2024Updated last year
- R package for statistical inference using partially observed Markov processes☆120Feb 10, 2026Updated last month
- Subplex Optimization Algorithm☆11Updated this week
- An R package containing functions used in the CDC Flu Forecasting competition☆11Oct 18, 2020Updated 5 years ago
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39May 4, 2020Updated 5 years ago
- Shiny based data explorer with report templates based on field selection☆11Oct 27, 2015Updated 10 years ago
- Time varying vector autoregressive state space modeling of community interactions in a Bayesian framework☆12Oct 4, 2021Updated 4 years ago
- Lightweight package for airport data and convenience tools to do common airport-data related tasks☆11Nov 11, 2025Updated 4 months ago
- A Tutorial Introduction to R☆16Sep 6, 2023Updated 2 years ago
- Analysis of global migration patterns of seasonal influenza viruses☆22Jul 24, 2019Updated 6 years ago
- Back end for producing indicators and loading them into the COVIDcast API.☆12Feb 28, 2026Updated 3 weeks ago
- download stats of R packages☆14Apr 18, 2025Updated 11 months ago
- ⚡️ Find and Practice the most popular Interview Algorithms and Data Structures problems.☆11Jan 11, 2021Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Phylogenetics between and within hosts at once, all along the genome.☆50Oct 2, 2024Updated last year
- ☆12Jul 11, 2024Updated last year
- A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbio…☆10Jan 23, 2026Updated 2 months ago
- Retrieve HIVdb algorithm as XML and apply locally to HIV sequences☆13Mar 4, 2026Updated 3 weeks ago
- Resources for Influenza Research☆24Aug 3, 2022Updated 3 years ago
- ☆16Aug 18, 2021Updated 4 years ago
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated 10 months ago
- SARS-CoV-2 RBD antibody escape calculator☆12Nov 19, 2024Updated last year
- ℹ️ Various examples on how to use certain features of Judge0.☆16Sep 16, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Daily analyses of genomic SARS-CoV-2 data☆15Nov 8, 2022Updated 3 years ago
- ☆14Jul 1, 2015Updated 10 years ago
- A package and environment manager for R☆18Mar 8, 2024Updated 2 years ago
- An R Package for Integrated Analysis and Visualization of Microbiome Data☆18Feb 19, 2026Updated last month
- Basic Epidemic, Activity, and Response COVID-19 model☆31Jul 6, 2020Updated 5 years ago
- ☆13Aug 14, 2017Updated 8 years ago
- R package for computing spatial position models☆32Jul 23, 2025Updated 8 months ago
- Molecular Epidemiology of Viruses in R☆19Sep 24, 2015Updated 10 years ago
- Simulation-based Inference for Epidemiological Dynamics☆26May 8, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CliMB: An AI-enabled Partner for Clinical Predictive Modeling☆28Dec 19, 2025Updated 3 months ago
- A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.☆17May 30, 2022Updated 3 years ago
- This is the official implementation of ClusTR: Clustering Training for Robustness paper.☆20Oct 20, 2021Updated 4 years ago
- plumage-inspired color palettes for R☆12Aug 21, 2020Updated 5 years ago
- 🔥 The most advanced open-source online code execution system in the world.☆10Dec 23, 2023Updated 2 years ago
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆21Nov 8, 2024Updated last year
- Phylodynamic estimation of nCoV incidence and prevalence☆19Feb 14, 2020Updated 6 years ago