Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.
☆22Jun 1, 2026Updated last month
Alternatives and similar repositories for datahub-study-curation-tools
Users that are interested in datahub-study-curation-tools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Feb 4, 2021Updated 5 years ago
- A centralized location for storing curated data from cBioPortal☆214Updated this week
- ☆23Updated this week
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Apr 25, 2023Updated 3 years ago
- ☆14Jun 11, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Rust wrapper for STAR aligner☆22Apr 13, 2026Updated 3 months ago
- Implementation of hashids v1.0.x in R☆19Oct 28, 2018Updated 7 years ago
- ☆11Feb 1, 2023Updated 3 years ago
- Use d3-timeline to visualize clinical data☆25Apr 29, 2020Updated 6 years ago
- OncoPrint visualization☆23Jun 8, 2022Updated 4 years ago
- funny geom/stat functions for visualization☆12Aug 30, 2023Updated 2 years ago
- Repository to reproduce analyses from manuscript titled "Noninvasive blood tests for fetal development predict gestational age and preter…☆11May 13, 2023Updated 3 years ago
- biostat final exam data and code☆10Jun 12, 2020Updated 6 years ago
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion☆10Oct 20, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A pipeline for primary analysis of shotgun metagenomic sequencing data☆11Jun 10, 2019Updated 7 years ago
- Code and paper repository for the ICML paper "Learning population level diffusions with generative recurrent networks"☆11May 26, 2016Updated 10 years ago
- Meta-analysis of drug target evidence in single-cell data☆17Oct 22, 2024Updated last year
- cBioPortal for Cancer Genomics☆1,027Updated this week
- An example of bundling webR as part of an application using webpack.☆14Nov 3, 2023Updated 2 years ago
- 通过图像统计细胞个数分析☆14Sep 1, 2019Updated 6 years ago
- Rust wrapper of the BWA C API☆19May 23, 2025Updated last year
- ☆14Apr 4, 2023Updated 3 years ago
- Tumor type classifier using cancer genomic panel sequencing data☆13Mar 12, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- CellNet, for cancer☆11Jul 14, 2022Updated 4 years ago
- CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer☆31Updated this week
- ☆62Jun 21, 2022Updated 4 years ago
- Snakemake-based amplicon processing protocol for 16S and ITS sequences.☆13Mar 18, 2024Updated 2 years ago
- Central repository for the VICC metakb web application☆15Updated this week
- Whole exome sequencing pipeline including advanced variant annotation features and automated PDF reporting.☆18Jan 29, 2026Updated 5 months ago
- ☆12Jan 8, 2026Updated 6 months ago
- Demo App: https://rinpharma.shinyapps.io/clinsight/ Development version website: https://openpharma.github.io/clinsight/dev☆13Mar 3, 2026Updated 4 months ago
- The advanced implementation for BioChatter, using Next.js☆18Jan 17, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R as a backend for web apps.☆10Mar 7, 2018Updated 8 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆14Jun 15, 2026Updated last month
- A way to extract specific information from CAZy☆13Nov 16, 2024Updated last year
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 10 months ago
- A Foundation Language Model For Multilayer Regulation of RNA☆15Nov 5, 2025Updated 8 months ago
- Collection of standard analytical pipelines for genomic and transcriptomic data☆22Updated this week
- a Customized Proteogenomic Workflow for Neoantigen Prediction and Selection☆24Apr 6, 2022Updated 4 years ago