LihongLab / Suppl-data-BenchmarkLinks
☆11Updated 2 years ago
Alternatives and similar repositories for Suppl-data-Benchmark
Users that are interested in Suppl-data-Benchmark are comparing it to the libraries listed below
Sorting:
- scDrug: From scRNA-seq to Drug Repositioning☆33Updated 2 years ago
- ☆27Updated 2 months ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 2 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆34Updated 3 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆32Updated 3 years ago
- ☆18Updated 3 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- ☆17Updated 3 years ago
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆18Updated 2 months ago
- ☆29Updated 6 months ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆67Updated 2 years ago
- ☆42Updated last year
- flexible CDR based distance metrics☆63Updated 9 months ago
- ☆30Updated 2 years ago
- This is the official codebase for methylGPT : a foundation model for the DNA methylome.☆38Updated last month
- repository containing analysis scripts and auxiliary files☆34Updated 5 years ago
- Functional Embedding of Gene Signatures☆43Updated last year
- R package for the analysis of single-cell immune repertoires☆42Updated 4 months ago
- ☆36Updated last week
- A Deep Learning based Efficacy Prediction System for drug discovery☆66Updated 2 years ago
- Collection of papers related to BCR repertoire analyses☆18Updated 3 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆61Updated 2 months ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Gene group activity utility functions for Scanpy☆76Updated 5 months ago
- ☆43Updated 7 months ago
- Code for "Feature selection methods affect the performance of scRNA-seq data integration and querying"☆24Updated 2 months ago
- ☆38Updated last year
- HLA-II ligand predictor.☆43Updated 2 years ago
- PRedictor of IMmunogenic Epitopes☆20Updated 3 weeks ago
- Inference of TCR motifs☆30Updated last month