brainstorm / s3-rust-htslib-bamLinks
AWS lambda S3 + rust-htslib: A serverless bioinformatics example
☆14Updated 3 years ago
Alternatives and similar repositories for s3-rust-htslib-bam
Users that are interested in s3-rust-htslib-bam are comparing it to the libraries listed below
Sorting:
- Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.☆21Updated 9 years ago
- Simple and transparent support for compressed files.☆81Updated 10 months ago
- Rust utility code☆32Updated last year
- ☆57Updated 3 years ago
- A library of common biomedical types.☆40Updated 8 months ago
- 🐦 spideog - Command line utility for Kraken2 reports.☆11Updated 5 years ago
- A server implementation of the htsget protocol for bioinformatics in Rust☆49Updated this week
- Fast and scalable minimal perfect hashing for massive key sets☆146Updated last year
- Light phylogeny library for Rust☆10Updated 2 months ago
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆129Updated 4 years ago
- Rust wrapper for STAR aligner☆18Updated 2 weeks ago
- A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.☆45Updated last week
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated last year
- Foundations for the Rust omics ecosystem.☆12Updated 2 months ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated 2 years ago
- Parallel Barnes-Hut t-SNE implementation written in Rust.☆90Updated 5 months ago
- ☆22Updated 3 years ago
- A genomic minhashing implementation in Rust☆101Updated 6 months ago
- Parallel Construction of Suffix Arrays in Rust☆26Updated 7 months ago
- Efficient querying of biological databases☆42Updated 2 months ago
- De Bruijn graphs in Rust☆72Updated last year
- Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.☆20Updated 3 weeks ago
- Faultless AST for Open Biomedical Ontologies.☆29Updated 2 months ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆62Updated 3 months ago
- Rust in bioinformatics and computational biology☆19Updated 3 years ago
- FASTA and FASTQ parsing in Rust☆80Updated 9 months ago
- ntHash implementation in Rust☆36Updated last year
- ☆50Updated 3 years ago
- bgzip support for Rust☆15Updated 2 years ago
- Rust implmentation of VCF parser☆25Updated 3 years ago