Alternatives and similar repositories for teaching

Users that are interested in teaching are comparing it to the libraries listed below

• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆68Updated 7 months ago
• biodatascience / compbio_src
  Introduction to Computational Biology - source Rmarkdown files
  ☆63Updated 10 months ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆35Updated last year
• 123xiaochen / VCFshiny
  ☆29Updated 11 months ago
• biocswirl-dev-team / BiocSwirl
  BiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactiv…
  ☆30Updated 4 years ago
• loukesio / ggvolc
  𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …
  ☆64Updated 2 weeks ago
• jpquast / ggplate
  Create Layout Plots of Biological Culture Plates and Microplates
  ☆99Updated 11 months ago
• barreiro-r / fastqc-viz
  A modest re-desing update for the classic FastQC report.
  ☆27Updated 2 weeks ago
• crazyhottommy / scripts-general-use
  ☆16Updated 8 years ago
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆55Updated 2 years ago
• EnvGen / snakemake-workflows
  Common Snakemake rules and workflows mainly directed towards Metagenomic analysis.
  ☆21Updated 6 years ago
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• ben-heil / dl_workshop
  The materials for the Deep Learning in Biology workshop put on by Alex Lee, David Nicholson, and Ben Heil
  ☆14Updated 4 years ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 5 years ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• js2264 / tidyCoverage
  ☆22Updated last year
• cxli233 / customized_upset_plots
  Make customized upset plots: from raw data to plots
  ☆61Updated 2 weeks ago
• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆79Updated last year
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆66Updated last year
• Roleren / ORFik
  ☆34Updated this week
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆21Updated last month
• ACSoupir / Bioinformatics_YouTube
  The Github Page with some of the information pertaining to the YouTube videos.
  ☆12Updated 4 years ago
• raynamharris / Shell_Intro_for_Bioinformatics_STG
  Intro to Shell for Bioinformatics - with STG examples
  ☆28Updated 9 years ago
• widdowquinn / ten_great_papers
  Ten great papers for wet lab biologists starting out in computational biology
  ☆51Updated 5 years ago
• CapraLab / lab-manuscript-template
  An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)
  ☆21Updated last year
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆28Updated 2 months ago
• quinlan-lab / sllobs-biostats
  ☆72Updated 3 years ago
• cxli233 / ggtraces
  A tidyverse and grammar of graphics powered line traces visualizer
  ☆30Updated 2 weeks ago
• bionitio-team / bionitio
  Demonstrating best practices for bioinformatics command line tools
  ☆116Updated 4 years ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago