Courses & workshops led by members of the Krishnan Lab.
☆24Sep 7, 2025Updated 7 months ago
Alternatives and similar repositories for teaching
Users that are interested in teaching are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Nov 3, 2021Updated 4 years ago
- In-depth analysis of normalization and transformation methods for building coexpression networks from RNA-seq data.☆15Aug 4, 2023Updated 2 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Apr 22, 2026Updated last week
- reverse gene expression score☆16Sep 8, 2023Updated 2 years ago
- ☆11Mar 1, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Mar 4, 2022Updated 4 years ago
- deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignme…☆12Oct 22, 2025Updated 6 months ago
- RCSM(Recommended Connectivity-map Scoring Methods)☆18Aug 2, 2019Updated 6 years ago
- Nextflow implementation of the GATK HaplotypeCaller pipeline☆13Dec 27, 2025Updated 4 months ago
- ☆20Nov 30, 2023Updated 2 years ago
- Connect the dots in networks.☆20Aug 28, 2020Updated 5 years ago
- Workshop: RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR☆13Aug 23, 2021Updated 4 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Jan 28, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A catalogue of available long read sequencing data analysis tools☆85Jan 6, 2026Updated 3 months ago
- Repo for Mastering Shiny Solutions☆12Aug 27, 2023Updated 2 years ago
- Browser-based GUI HDF Viewer https://broh5.readthedocs.io☆13Dec 26, 2025Updated 4 months ago
- Web content for Meren Lab☆11Updated this week
- A Teaching Engine for Genomics☆12Mar 21, 2021Updated 5 years ago
- ☆12Dec 12, 2014Updated 11 years ago
- Site to help biologists wade their way into bioinformatics.☆35Apr 7, 2026Updated 3 weeks ago
- cyREST examples for Python users.☆11Feb 20, 2018Updated 8 years ago
- Easy to Annotate Helitrons Unix-like command line.☆10Feb 14, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Oct 13, 2021Updated 4 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Oct 9, 2020Updated 5 years ago
- This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedica…☆12Aug 25, 2023Updated 2 years ago
- Committee Meeting Reports - LaTeX☆11Jun 11, 2018Updated 7 years ago
- Creates an N-chart for comparing assembly lengths, including script for counting assembly lengths from a fasta file☆13Feb 2, 2017Updated 9 years ago
- The Loss-of-Function ToolKit (LoFTK) allows efficient and automated prediction of LoF variants from both genotyped and sequenced genomes,…☆10Jul 30, 2025Updated 9 months ago
- An even better Python program to query .fasta files against the COI database of www.boldsystems.org☆11Oct 28, 2024Updated last year
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- mdust from DFCI Gene Indices Software Tools (archived for a historical record only)☆11Jan 2, 2015Updated 11 years ago
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated 3 months ago
- Introduction to data management in R workshop series.☆10Mar 7, 2019Updated 7 years ago
- SAveRUNNER (Searching off-lAbel dRUg aNd NEtwoRk) - a network-based approach for drug repurposing☆13Nov 27, 2024Updated last year
- FiveThirtyEight 2020 Forecast Approximation☆11Nov 16, 2020Updated 5 years ago
- Mass Action Stoichiometric Simulation (MASS) Toolbox☆12Aug 1, 2017Updated 8 years ago
- Workflows used for processing whole genome sequence data + germline variant calling. This Repository has been archived, please visit the …☆28Jan 4, 2021Updated 5 years ago