som-shahlab / motor_tutorialLinks
Tutorial repository for the official MOTOR release
☆13Updated 3 months ago
Alternatives and similar repositories for motor_tutorial
Users that are interested in motor_tutorial are comparing it to the libraries listed below
Sorting:
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆62Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- Training HuggingFace models on EHR data☆25Updated this week
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆35Updated 2 weeks ago
- ☆70Updated 2 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆62Updated 3 weeks ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆174Updated this week
- ☆78Updated last year
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆37Updated 3 months ago
- ☆37Updated last year
- Reading list for multimodal learning in healthcare☆11Updated last year
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆122Updated last year
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆26Updated last week
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆142Updated last month
- source codes based on PyTorch to analyze EHR☆138Updated last year
- Code for BEHRT: Transformer for Electronic Health Records☆110Updated 2 years ago
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆33Updated last year
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆93Updated 11 months ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆16Updated last year
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆69Updated this week
- Code repository to create the MIMIC-CDM Dataset.☆33Updated 3 months ago
- A collection of ETLs from common data formats to Medical Event Data Standard☆29Updated last month
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆83Updated 2 years ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆33Updated 3 weeks ago
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆112Updated last year
- SurvTRACE: Transformers for Survival Analysis with Competing Events☆53Updated last year
- General tutorials for the setup and use of MedCAT.☆37Updated 2 weeks ago
- A toolkit for developing foundation models using Electronic Health Record (EHR) data.☆35Updated this week