Medical-Event-Data-Standard / MEDS-DEVLinks
The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health
☆31Updated this week
Alternatives and similar repositories for MEDS-DEV
Users that are interested in MEDS-DEV are comparing it to the libraries listed below
Sorting:
- A simple set of MEDS polars-based ETL and transformation functions☆36Updated 2 weeks ago
- Limited automatic tabular ML pipelines for generic MEDS datasets.☆18Updated 3 months ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆38Updated last month
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆86Updated 2 weeks ago
- A collection of ETLs from common data formats to Medical Event Data Standard☆36Updated 3 months ago
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆41Updated last month
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆16Updated last year
- A high-performance database and Python reader interface for MEDS datasets☆19Updated last month
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆115Updated 4 months ago
- Training HuggingFace models on EHR data☆32Updated 2 weeks ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆157Updated last week
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆65Updated 5 months ago
- ☆25Updated 5 months ago
- ☆14Updated last year
- ☆79Updated 8 months ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆200Updated 5 months ago
- Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how☆19Updated 2 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆97Updated 4 months ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆83Updated 3 weeks ago
- ☆31Updated 2 years ago
- General Healthcare Predictive Framework☆18Updated 3 weeks ago
- TemporAI: ML-centric Toolkit for Medical Time Series☆123Updated last year
- ☆45Updated 2 years ago
- Repository for the HiRID ICU Benchmark (HiB) project☆59Updated 2 years ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records☆50Updated 2 months ago
- Resources for Machine Learning Explainability☆86Updated last year
- Repository for the paper 'MDS-ED: Multimodal Decision Support in the Emergency Department – a benchmark dataset based on MIMIC-IV'.☆20Updated 6 months ago
- Code for BEHRT: Transformer for Electronic Health Records☆116Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆86Updated this week
- Analyzing different ML model comparison metrics☆15Updated last year