Code for doing machine learning with various EHRs
☆22Mar 1, 2023Updated 3 years ago
Alternatives and similar repositories for ehr_ml
Users that are interested in ehr_ml are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Weak supervision methods for extracting real world evidence from EHRs☆35Apr 7, 2020Updated 5 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆167Mar 16, 2026Updated last week
- Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records☆19Mar 8, 2023Updated 3 years ago
- The repository for the paper "Predicting in-hospital mortality by combining clinical notes with time-series data"☆12May 23, 2021Updated 4 years ago
- ☆12Oct 22, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Code for BEHRT: Transformer for Electronic Health Records☆121Apr 6, 2023Updated 2 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆213Jun 6, 2025Updated 9 months ago
- Reproducing feature engineering & oversampling experiments on TPEHG DB and assessing the real impact of over-sampling☆16Jan 19, 2020Updated 6 years ago
- Code and webpages for our study on teaching humans to defer to an AI☆12Nov 6, 2023Updated 2 years ago
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆33Jun 6, 2025Updated 9 months ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- Course material for Enrichment analysis course by SIB☆13Feb 2, 2026Updated last month
- Python implementation of POPDx - Predictions for unseen, rare, and common labels.☆11Jun 26, 2024Updated last year
- InspectOmop is a lightweight python 3 package that assists in the extraction of electronic health record(EHR) data from relational databa…☆15Mar 6, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A Quarto-based collection of supplementary material from the clinical prediction models book.☆18Updated this week
- python code for BRLTM model☆14Jan 17, 2021Updated 5 years ago
- Biomedical concept relatedness benchmark sampled from electronic health records☆11Jul 14, 2022Updated 3 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Mar 29, 2022Updated 4 years ago
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Sep 8, 2017Updated 8 years ago
- Pytorch implementation of Med2Vec.☆11Apr 26, 2024Updated last year
- Forecasting library in python☆13Sep 6, 2019Updated 6 years ago
- ☆10Nov 15, 2015Updated 10 years ago
- Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record☆108Nov 27, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Keyword Extraction and Analysis Pipeline & Application with KeyBERT and Taipy☆17Apr 18, 2023Updated 2 years ago
- Dataset of 57 mock medical primary care consultations: audio, consultation notes, human utterance-level transcripts.☆75Nov 16, 2022Updated 3 years ago
- ☆11Jan 12, 2022Updated 4 years ago
- Gravity project FHIR implementation guide covering social determinants of health, including data capture, recording SDOH issues and makin…☆18Mar 19, 2026Updated last week
- PCORnet Ontology to OMOP - beta!☆11Feb 7, 2024Updated 2 years ago
- This repo is the implementation of "A Neural Topic-Attention Model for Medical Term Abbreviation Disambiguation".☆15Dec 3, 2019Updated 6 years ago
- ScalaTIKZ is an open-source library for PGF/TIKZ vector graphics.☆23Mar 16, 2026Updated last week
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆45Dec 9, 2025Updated 3 months ago
- Multi-LexSum is an abstractive summarization dataset for US Civil Rights Lawsuits☆21Dec 15, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Tumor Dynamic Neural-ODE☆10Jan 29, 2024Updated 2 years ago
- Shiny application implementing Consensus Clustering for various clustering algorithms.☆13Jul 6, 2018Updated 7 years ago
- An experimental project to try how MLX Swift works☆11Jan 15, 2026Updated 2 months ago
- Code for "Classifying Unstructured Clinical Notes via Automatic Weak Supervision", MLHC 2022.☆16Mar 10, 2023Updated 3 years ago
- 🐍 The classic snake game implemented in my own way☆11Feb 9, 2025Updated last year
- ☆19Jul 7, 2025Updated 8 months ago
- Yet Another SEquence Tagger☆10Dec 8, 2022Updated 3 years ago