A collection of ETLs from common data formats to Medical Event Data Standard
☆40Aug 5, 2025Updated 9 months ago
Alternatives and similar repositories for meds_etl
Users that are interested in meds_etl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆169Apr 27, 2026Updated last week
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆111Nov 5, 2025Updated 6 months ago
- A high-performance database and Python reader interface for MEDS datasets☆20Jan 26, 2026Updated 3 months ago
- A simple set of MEDS polars-based ETL and transformation functions☆41Apr 27, 2026Updated last week
- General Healthcare Predictive Framework☆24Dec 6, 2025Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆44Updated this week
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆216Jun 6, 2025Updated 11 months ago
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆115Jul 2, 2025Updated 10 months ago
- Official repository of "EHR-SeqSQL : A Sequential Text-to-SQL Dataset For Interactively Exploring Electronic Health Records" (ACL 2024 Fi…☆17Jul 5, 2024Updated last year
- ☆30Jun 8, 2025Updated 11 months ago
- ☆14Aug 9, 2024Updated last year
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆45Dec 9, 2025Updated 5 months ago
- APLUS ML = A Python Library for Usefulness Simulations of Machine Learning models☆26Oct 16, 2025Updated 6 months ago
- A collection of resources and information for concrete skills that are helpful when pursuing a PhD in computer science (specifically in M…☆23Apr 18, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated 9 months ago
- UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge☆13Nov 16, 2023Updated 2 years ago
- Repository for the paper 'Enhancing Clinical Decision Support with Physiological Waveforms — A Multimodal Benchmark in Emergency Care'.☆27Apr 30, 2025Updated last year
- PyTorch extension for handling deeply nested sequences of variable length☆15Mar 19, 2026Updated last month
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Jun 18, 2024Updated last year
- Verifying Facts in LLM-Generated Clinical Text with Electronic Health Records☆32Jan 2, 2026Updated 4 months ago
- REMed: Retrieval-Enhanced Medical prediction model☆23Jan 8, 2025Updated last year
- Zero-shot clinical trial matching with LLMs☆17Mar 1, 2025Updated last year
- [NeurIPS 2025] This is the official repository for "RAD: Towards Trustworthy Retrieval-Augmented Multi-modal Clinical Diagnosis"☆27Nov 21, 2025Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆37Apr 11, 2023Updated 3 years ago
- ☆10Nov 3, 2023Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆90Apr 24, 2026Updated 2 weeks ago
- ☆24Sep 25, 2020Updated 5 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆74Jun 17, 2025Updated 10 months ago
- ☆49Oct 25, 2023Updated 2 years ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆107Apr 28, 2026Updated last week
- "How to Trust Your Diffusion Models: A Convex Optimization Approach to Conformal Risk Control"☆17Jan 6, 2026Updated 4 months ago
- ☆52Oct 2, 2025Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Med-BERT, contextualized embedding model for structured EHR data☆324Feb 19, 2024Updated 2 years ago
- Flexibly track outputs and grad-outputs of torch.nn.Module.☆13Oct 6, 2023Updated 2 years ago
- ☆12Jul 21, 2024Updated last year
- An updated version of eICU Benchmark with an updated problem definition on LoS and Decompensation tasks☆12Aug 12, 2021Updated 4 years ago
- ☆16Sep 6, 2022Updated 3 years ago
- ☆19Oct 13, 2022Updated 3 years ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records☆59Sep 10, 2025Updated 7 months ago