A simple set of MEDS polars-based ETL and transformation functions
☆42Aug 5, 2026Updated 2 months ago
Alternatives and similar repositories for MEDS_transforms
Users that are interested in MEDS_transforms are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Limited automatic tabular ML pipelines for generic MEDS datasets.☆21Oct 23, 2026Updated last week
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆43Updated this week
- A high-performance database and Python reader interface for MEDS datasets☆22Aug 12, 2026Updated 2 months ago
- ☆30Jun 8, 2025Updated last year
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆50Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A collection of ETLs from common data formats to Medical Event Data Standard☆44Aug 5, 2025Updated last year
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆142Jun 12, 2026Updated 4 months ago
- A MEDS, "Everything-is-code" style Autoregressive Generative Model, capable of zero-shot inference.☆12Oct 19, 2026Updated 2 weeks ago
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆17Jan 3, 2024Updated 2 years ago
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆118Jul 2, 2025Updated last year
- General Healthcare Predictive Framework☆24Dec 6, 2025Updated 10 months ago
- The MIMIC-IV MEDS ETL☆27Updated this week
- Code repository for DBMI's EHR foundation model benchmarks.☆13Jul 15, 2026Updated 3 months ago
- ☆14Aug 9, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆50Dec 9, 2025Updated 10 months ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆183Oct 19, 2026Updated 2 weeks ago
- CEHR-GPT: Generating Electronic Health Records with Chronological Patient Timelines☆20Updated this week
- A collection of resources and information for concrete skills that are helpful when pursuing a PhD in computer science (specifically in M…☆23Apr 18, 2023Updated 3 years ago
- ☆96Mar 8, 2025Updated last year
- [npj Digital Medicine 2025] Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks☆22Jul 8, 2025Updated last year
- Training HuggingFace models on EHR data☆55Nov 2, 2025Updated last year
- Official repository for distributing ECG-Reasoning-Benchmark dataset☆20Sep 8, 2026Updated last month
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆19May 5, 2026Updated 5 months ago
- Tutorial repository for the official MOTOR release☆15Feb 22, 2025Updated last year
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆77Jun 17, 2025Updated last year
- ☆68Oct 2, 2025Updated last year
- PyTorch extension for handling deeply nested sequences of variable length☆15Sep 9, 2026Updated last month
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆234Jun 6, 2025Updated last year
- 🏥Generate task cohort for the YAIB framework.☆15Nov 19, 2025Updated 11 months ago
- Codebase for "Clairvoyance: a Unified, End-to-End AutoML Pipeline for Medical Time Series"☆12Nov 1, 2020Updated 6 years ago
- ☆29Aug 3, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MD-ViSCo: A Unified Model for Multi-Directional Vital Sign Waveform Conversion. IEEE JBHI 2026.☆13Apr 17, 2026Updated 6 months ago
- [CIKM2025] SemiSegECG: A Multi-Dataset Benchmark for Semi-Supervised Semantic Segmentation in ECG Delineation☆21Jan 21, 2026Updated 9 months ago
- Installing MIMIC-IV in a local Postgres database☆49Jun 28, 2021Updated 5 years ago
- Toward Expert-Level Medical Text Validation with Language Models☆20Oct 23, 2025Updated last year
- ☆15Mar 12, 2026Updated 7 months ago
- OMOP standardization pipeline for ICU databases☆48Feb 24, 2025Updated last year
- crisp-pipeline☆28Apr 6, 2026Updated 6 months ago