A simple set of MEDS polars-based ETL and transformation functions
☆42Aug 5, 2026Updated 3 weeks ago
Alternatives and similar repositories for MEDS_transforms
Users that are interested in MEDS_transforms are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Limited automatic tabular ML pipelines for generic MEDS datasets.☆20Apr 14, 2026Updated 4 months ago
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆43Aug 20, 2026Updated last week
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆47Jun 4, 2026Updated 2 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆132Jun 12, 2026Updated 2 months ago
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆118Jul 2, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆17Jan 3, 2024Updated 2 years ago
- General Healthcare Predictive Framework☆24Dec 6, 2025Updated 8 months ago
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆49Dec 9, 2025Updated 8 months ago
- [npj Digital Medicine 2025] Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks☆21Jul 8, 2025Updated last year
- Official repository for distributing ECG-Reasoning-Benchmark dataset☆17Jul 30, 2026Updated last month
- ☆96Mar 8, 2025Updated last year
- An updated version of eICU Benchmark with an updated problem definition on LoS and Decompensation tasks☆14Aug 12, 2021Updated 5 years ago
- ☆14Jul 13, 2022Updated 4 years ago
- Analyzing different ML model comparison metrics☆17Jan 20, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- CEHR-GPT: Generating Electronic Health Records with Chronological Patient Timelines☆17Jul 20, 2026Updated last month
- ☆14Aug 9, 2024Updated 2 years ago
- ☆29Aug 3, 2021Updated 5 years ago
- A Polars plugin for encrypting and decrypting data using AES-GSM-CIV algorithm in Rust☆11Jan 8, 2025Updated last year
- REMed: Retrieval-Enhanced Medical prediction model☆24Jan 8, 2025Updated last year
- ☆62Oct 2, 2025Updated 11 months ago
- crisp-pipeline☆28Apr 6, 2026Updated 4 months ago
- The MOLGENIS Software generator tool for creating Dynamic Software Infrastructure used in the Life Sciences☆19Sep 5, 2013Updated 12 years ago
- DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding☆22Apr 29, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Jan 10, 2021Updated 5 years ago
- ☆25Sep 25, 2020Updated 5 years ago
- Expert-level AI radiology report evaluator☆39Apr 1, 2025Updated last year
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated last year
- R Package: Augmented Inverse Probability Weighted (AIPW) Estimation for Average Causal Effect☆28Apr 11, 2026Updated 4 months ago
- Repository for the HiRID ICU Benchmark (HiB) project☆62Jul 13, 2023Updated 3 years ago
- ☆15Feb 28, 2023Updated 3 years ago
- Plugin that provides pairing functions to the Polars library☆14Feb 14, 2025Updated last year
- The benchmark tasks and evaluation harness for "PhysicianBench: Evaluating LLM Agents in Real-World EHR Environments".☆53Aug 13, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Verifying Facts in LLM-Generated Clinical Text with Electronic Health Records☆39Aug 17, 2026Updated 2 weeks ago
- ☆16Sep 6, 2022Updated 3 years ago
- ☆19Oct 13, 2022Updated 3 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Jun 18, 2024Updated 2 years ago
- A Multitask Conversational Vision-Language Model for Radiology☆17Aug 2, 2026Updated last month
- Evaluation code for the PhysioNet/CinC Challenge 2021☆19Nov 16, 2021Updated 4 years ago
- Public code from paper: 'Towards a decision support tool for intensive care discharge: machine learning algorithm development using elect…☆10Jun 4, 2019Updated 7 years ago