hoon9405 / GenHPFLinks
General Healthcare Predictive Framework
☆22Updated 3 weeks ago
Alternatives and similar repositories for GenHPF
Users that are interested in GenHPF are comparing it to the libraries listed below
Sorting:
- A simple set of MEDS polars-based ETL and transformation functions☆39Updated last month
- A collection of ETLs from common data formats to Medical Event Data Standard☆37Updated 4 months ago
- ☆14Updated last year
- ☆82Updated 9 months ago
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆35Updated last month
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆93Updated last month
- Limited automatic tabular ML pipelines for generic MEDS datasets.☆18Updated 4 months ago
- Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…☆116Updated 5 months ago
- Training HuggingFace models on EHR data☆38Updated last month
- REMed: Retrieval-Enhanced Medical prediction model☆22Updated 11 months ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records☆54Updated 3 months ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆205Updated 6 months ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆161Updated 2 weeks ago
- A high-performance database and Python reader interface for MEDS datasets☆19Updated 2 months ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆38Updated 2 months ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆139Updated 4 months ago
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆44Updated 3 weeks ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆87Updated 3 years ago
- ☆27Updated 6 months ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆88Updated 3 weeks ago
- ☆35Updated 2 months ago
- ☆37Updated 2 years ago
- Repository for the paper 'MDS-ED: Multimodal Decision Support in the Emergency Department – a benchmark dataset based on MIMIC-IV'.☆20Updated 8 months ago
- The code for the paper "MediTab: Scaling Medical Tabular Data Predictors via Data Consolidation, Enrichment, and Refinement"☆23Updated last year
- Medical multi-modal learning with missing modality data (MLHC 2023)☆14Updated 2 years ago
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆37Updated 11 months ago
- ☆46Updated 2 years ago
- UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge☆13Updated 2 years ago
- A customizable pipeline for data extraction from MIMIC-IV; now multimodal!☆288Updated last month
- Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how☆21Updated 2 years ago