Alternatives and similar repositories for meds-torch

Users that are interested in meds-torch are comparing it to the libraries listed below

• justin13601 / ACES
  [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams
  ☆33Updated 3 weeks ago
• mmcdermott / MEDS_transforms
  A simple set of MEDS polars-based ETL and transformation functions
  ☆31Updated 3 weeks ago
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆29Updated last month
• Medical-Event-Data-Standard / MEDS-DEV
  The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health
  ☆26Updated last week
• som-shahlab / hf_ehr
  Training HuggingFace models on EHR data
  ☆25Updated this week
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆62Updated 3 weeks ago
• som-shahlab / meds_reader
  ☆19Updated 3 weeks ago
• cumc-dbmi / cehrbert
  CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
  ☆35Updated 2 weeks ago
• hoon9405 / GenHPF
  General Healthcare Predictive Framework
  ☆17Updated 2 months ago
• mmcdermott / MEDS_Tabular_AutoML
  Limited automatic tabular ML pipelines for generic MEDS datasets.
  ☆17Updated 3 weeks ago
• ipolharvard / ethos-paper
  ☆70Updated 2 months ago
• mmcdermott / EventStreamGPT
  Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…
  ☆112Updated 2 months ago
• ratschlab / HIRID-ICU-Benchmark
  Repository for the HiRID ICU Benchmark (HiB) project
  ☆56Updated last year
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆142Updated last month
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆69Updated this week
• mmcdermott / comprehensive_MTL_EHR
  Source code for a comprehensive analysis of MTL over EHR timeseries data.
  ☆37Updated 2 years ago
• MLD3 / FIDDLE-experiments
  Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139
  ☆24Updated 2 years ago
• nliulab / mimic4ed-benchmark
  Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.
  ☆83Updated 2 years ago
• mmcdermott / MIMICIV_FMs_public
  Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.
  ☆16Updated last year
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆93Updated 11 months ago
• vanderschaarlab / temporai
  TemporAI: ML-centric Toolkit for Medical Time Series
  ☆117Updated last year
• soda-inria / causal_ehr_mimic
  Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how
  ☆18Updated last year
• whaleloops / TransformEHR
  ☆37Updated last year
• Jwoo5 / integrated-ehr-pipeline
  ☆14Updated 9 months ago
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆62Updated last year
• btheodorou99 / HALO_Inpatient
  ☆25Updated 4 months ago
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆174Updated this week
• ratschlab / circEWS
  circEWS public code
  ☆69Updated 7 months ago
• AI4HealthUOL / MDS-ED
  Repository for the paper 'MDS-ED: Multimodal Decision Support in the Emergency Department – a benchmark dataset based on MIMIC-IV'.
  ☆18Updated last month
• USM-CHU-FGuyon / BlendedICU
  OMOP standardization pipeline for ICU databases
  ☆41Updated 3 months ago