almarklein / pirtLinks
Python Image Registration Toolkit
☆24Updated 5 months ago
Alternatives and similar repositories for pirt
Users that are interested in pirt are comparing it to the libraries listed below
Sorting:
- Python module to analyse skeleton (thin object) images☆128Updated last month
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated 3 weeks ago
- A napari plugin for itk-elastix☆38Updated last year
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated 11 months ago
- 2D image registration in python, using napari.☆16Updated 3 years ago
- cupy-accelerated DIPY☆10Updated 4 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆60Updated last week
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆159Updated this week
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆17Updated last month
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- Montaging for microscopy imaging files☆30Updated 2 weeks ago
- Easily read and write ome-tiff images in python☆27Updated last year
- Fill holes in binary 2D & 3D images fast.☆24Updated last month
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆79Updated last week
- Python module for registering and fusing multi-view microscopy data☆23Updated 4 months ago
- CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image☆46Updated 3 years ago
- The Biomedical Image Segmentation App is a free and open-source application for segmenting 3D images such as CT and MRI scans, developed …☆53Updated this week
- A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.☆89Updated 8 months ago
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆108Updated 5 years ago
- GPU accelerated image/volume processing in Python☆111Updated 2 months ago
- A volume slicer for Dash☆26Updated 4 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- A python script editor plugin for napari☆11Updated 2 years ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆117Updated last year
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆16Updated 3 years ago
- Cython based wrapper for IRTK☆10Updated 9 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated last week
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 months ago
- WebGL-based viewer for volumetric data☆24Updated last week
- Python TEASAR Skeletonization for Sparse Labels☆9Updated 2 years ago