Alternatives and similar repositories for pirt

Users that are interested in pirt are comparing it to the libraries listed below

• MIDA-group / globalign
  Fast global mutual information-based rigid alignment in the Fourier domain
  ☆32Updated last year
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆56Updated 3 months ago
• seung-lab / fill_voids
  Fill holes in binary 2D & 3D images fast.
  ☆26Updated last month
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆135Updated last week
• seung-lab / fastmorph
  Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.
  ☆19Updated this week
• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 3 years ago
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated last week
• dipy / cudipy
  cupy-accelerated DIPY
  ☆11Updated 4 years ago
• lassoan / slicerio
  Utilities for reading and writing files created by 3D Slicer
  ☆41Updated 8 months ago
• seung-lab / kimimaro
  Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
  ☆170Updated last week
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆39Updated 3 weeks ago
• plotly / dash-slicer
  A volume slicer for Dash
  ☆26Updated 7 months ago
• InsightSoftwareConsortium / ITKMontage
  Montaging for microscopy imaging files
  ☆30Updated last month
• maweigert / gputools
  GPU accelerated image/volume processing in Python
  ☆112Updated 5 months ago
• pyimreg / python-register
  Linear and non-linear image registration methods, using scipy and numpy.
  ☆63Updated 12 years ago
• mritools / cupyimg
  CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image
  ☆46Updated 4 years ago
• ClearVolume / PyClearVolume
  python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.
  ☆15Updated 8 years ago
• maweigert / spimagine
  GPU accelerated volume rendering / processing in Python
  ☆119Updated 6 years ago
• BioMedIA / python-irtk
  Cython based wrapper for IRTK
  ☆10Updated 9 years ago
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆24Updated this week
• JacobBumgarner / VesselVio
  An open-source application for the analysis and visualization of segmented vasculature datasets
  ☆123Updated last year
• almarklein / pyelastix
  Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images
  ☆109Updated 5 years ago
• jaketmp / pyCompare
  Python module for generating Bland-Altman plots
  ☆37Updated 2 years ago
• mhe / pynrrd
  Simple pure-python module for reading and writing nrrd files.
  ☆122Updated 8 months ago
• dtward / image_lddmm_tensorflow
  Image mapping using the LDDMM algorithm, implemented in tensorflow
  ☆17Updated 4 years ago
• glichtner / pystackreg
  A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
  ☆91Updated 11 months ago
• TomographicImaging / CCPi-Regularisation-Toolkit
  The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks
  ☆60Updated 10 months ago
• imjoy-team / kaibu
  Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.
  ☆35Updated 6 months ago
• biomedisa / biomedisa
  The Biomedical Image Segmentation App is a free and open-source application for segmenting 3D images such as CT and MRI scans, developed …
  ☆53Updated 2 weeks ago
• pyapp-kit / ndv
  Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
  ☆81Updated this week