JacobBumgarner / VesselVio
An open-source application for the analysis and visualization of segmented vasculature datasets
β108Updated 10 months ago
Alternatives and similar repositories for VesselVio:
Users that are interested in VesselVio are comparing it to the libraries listed below
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ68Updated 3 years ago
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ47Updated 9 months ago
- Implementation of the DeepVesselNet deep learning networkβ144Updated last year
- Multi-modal Image Registration And Connectivity anaLysisβ43Updated last week
- β84Updated last year
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, β¦β52Updated this week
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of imagesβ231Updated last week
- Recipes for common medical image segmentation tasks using 3D Slicerβ54Updated 2 years ago
- Very fast greedy diffeomorphic registration codeβ71Updated last month
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.β52Updated 2 months ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMapβ119Updated this week
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registrationβ11Updated 3 years ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utiliβ¦β153Updated 2 weeks ago
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Pythonβ75Updated 2 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)β145Updated 2 weeks ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vesselsβ¦β44Updated last year
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkitβ90Updated 6 months ago
- Utilities for reading and writing files created by 3D Slicerβ37Updated last month
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI spaceβ49Updated 2 years ago
- β29Updated 11 months ago
- β108Updated last month
- Python Vascular Network Analysisβ22Updated 10 months ago
- Image analysis approaches to analyze the OAI magnetic resonance imagesβ23Updated 3 months ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.β54Updated 2 weeks ago
- Extension to import microCT data and conduct 3D morphometrics in Slicerβ98Updated last week
- An abundance of augmentation layersβ14Updated last month
- Application for analysis and modelling of volumetric medical imaging dataβ27Updated 10 months ago
- β82Updated 3 months ago
- β96Updated last month