An open-source application for the analysis and visualization of segmented vasculature datasets
β132May 18, 2024Updated last year
Alternatives and similar repositories for VesselVio
Users that are interested in VesselVio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ76Aug 23, 2021Updated 4 years ago
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ54Jun 6, 2024Updated last year
- β123Apr 2, 2025Updated last year
- Implementation of the DeepVesselNet deep learning networkβ155Jul 7, 2023Updated 2 years ago
- Internal server side implementation of trameβ14Mar 30, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PYthon RAndom SAmpling for MEshesβ15Updated this week
- Official implementation of the paper: Narotamo, H., Silveira, M., & Franco, C. A. (2024). 3DVascNet: An Automated Software for Segmentatiβ¦β12Jan 21, 2025Updated last year
- β280Feb 14, 2024Updated 2 years ago
- Code and dataset for the MICCAI 2020 paper: Automated Intracranial Artery Labeling using a Graph Neural Network and Hierarchical Refinemeβ¦β29Aug 6, 2022Updated 3 years ago
- MATLAB code to derive the network graph of a 3D voxel skeletonβ25Dec 5, 2018Updated 7 years ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMapβ140Apr 23, 2026Updated 2 weeks ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vesselsβ¦β50Dec 19, 2023Updated 2 years ago
- Cranial 4D Flow Analysis Toolβ15Updated this week
- Python Vascular Network Analysisβ27Feb 25, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off β’ AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- 4D reconstruction of developmental trajectories using spherical harmonicsβ23Mar 25, 2025Updated last year
- A link prediction algorithm tailored to flow-driven spatial networks. Paper accepted @ WACV24.β22Jan 18, 2024Updated 2 years ago
- Cerebrovascular Image Analysis - (Matlab) Toolkitβ27Sep 18, 2022Updated 3 years ago
- GitHub Action to setup a headless display on Linux and Windows (not needed on MacOS)β30Mar 10, 2026Updated last month
- OpenVR and OpenXR variants of PyVistaβ18Jan 14, 2023Updated 3 years ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Datasetβ41Sep 11, 2025Updated 7 months ago
- [MICCAIW 2025] ShapeKitβ21Jan 6, 2026Updated 4 months ago
- Internal client side implementation of trameβ12Updated this week
- [NeurIPS 2024] Official repository for "Physics-Regularized Multi-Modal Image Assimilation for Brain Tumor Localization"β21Jan 6, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Open python perfusion tool for CTP and MRP ||| MRI DSC CT toolbox toolkit |||β49Nov 20, 2025Updated 5 months ago
- There are some examples of 3D Medical Image Processβ42Apr 7, 2020Updated 6 years ago
- β57Jan 2, 2024Updated 2 years ago
- Z-stack Depth Colorcode ImageJ FIJI pluginβ25Nov 6, 2025Updated 6 months ago
- Convert .ims to .tifβ14Jul 15, 2021Updated 4 years ago
- Pyvista imgui integrationβ21Apr 23, 2024Updated 2 years ago
- Init with augmentation lossβ19Feb 7, 2023Updated 3 years ago
- β10May 10, 2024Updated last year
- β11Dec 8, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean β’ AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, β¦β55Apr 23, 2026Updated 2 weeks ago
- A curve skeletonization method for elongated objects that may be noisy, IEEE WACV paper, Aug. 2018 update.β11Apr 15, 2024Updated 2 years ago
- Demo FastAPI and Three.js application using PyVistaβ28Apr 27, 2026Updated last week
- Deep Vessel Segmentation by Learning Graphical Connectivityβ99Oct 15, 2019Updated 6 years ago
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensitiβ¦β28Apr 13, 2026Updated 3 weeks ago
- [MICCAI 2024] Centerline Boundary Dice Loss for Vascular Segmentationβ87Dec 9, 2025Updated 4 months ago
- Transfer Learning for Stenosis Detection in X-ray Coronary Angiographyβ13Jul 3, 2021Updated 4 years ago