An open-source application for the analysis and visualization of segmented vasculature datasets
β131May 18, 2024Updated last year
Alternatives and similar repositories for VesselVio
Users that are interested in VesselVio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ76Aug 23, 2021Updated 4 years ago
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ54Jun 6, 2024Updated last year
- β121Apr 2, 2025Updated last year
- Implementation of the DeepVesselNet deep learning networkβ155Jul 7, 2023Updated 2 years ago
- Internal server side implementation of trameβ14Mar 30, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Provides current Voreen Sources (with modifications) by Uni MΓΌnster to build voreen for PC, server or lrz cluster, including workspaces aβ¦β13Mar 2, 2024Updated 2 years ago
- VAN-GAN: Vessel Segmentation Generative Adversarial Network. A tool to segment 3D vascular networks without paired training data.β22Jan 7, 2026Updated 3 months ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"β36Apr 4, 2025Updated last year
- Official implementation of the paper: Narotamo, H., Silveira, M., & Franco, C. A. (2024). 3DVascNet: An Automated Software for Segmentatiβ¦β11Jan 21, 2025Updated last year
- Code and dataset for the MICCAI 2020 paper: Automated Intracranial Artery Labeling using a Graph Neural Network and Hierarchical Refinemeβ¦β29Aug 6, 2022Updated 3 years ago
- MATLAB code to derive the network graph of a 3D voxel skeletonβ25Dec 5, 2018Updated 7 years ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMapβ140Apr 3, 2026Updated last week
- Python Vascular Network Analysisβ27Feb 25, 2026Updated last month
- 4D reconstruction of developmental trajectories using spherical harmonicsβ23Mar 25, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A link prediction algorithm tailored to flow-driven spatial networks. Paper accepted @ WACV24.β22Jan 18, 2024Updated 2 years ago
- Cerebrovascular Image Analysis - (Matlab) Toolkitβ26Sep 18, 2022Updated 3 years ago
- OpenVR and OpenXR variants of PyVistaβ18Jan 14, 2023Updated 3 years ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Datasetβ41Sep 11, 2025Updated 7 months ago
- [MICCAIW 2025] ShapeKitβ20Jan 6, 2026Updated 3 months ago
- Internal client side implementation of trameβ12Mar 24, 2026Updated 3 weeks ago
- [NeurIPS 2024] Official repository for "Physics-Regularized Multi-Modal Image Assimilation for Brain Tumor Localization"β21Jan 6, 2025Updated last year
- Open python perfusion tool for CTP and MRP ||| MRI DSC CT toolbox toolkit |||β47Nov 20, 2025Updated 4 months ago
- There are some examples of 3D Medical Image Processβ42Apr 7, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A project to create synthetic vascular networks utilising L-Systems.β24Dec 2, 2025Updated 4 months ago
- β57Jan 2, 2024Updated 2 years ago
- Z-stack Depth Colorcode ImageJ FIJI pluginβ25Nov 6, 2025Updated 5 months ago
- Convert .ims to .tifβ14Jul 15, 2021Updated 4 years ago
- Pyvista imgui integrationβ21Apr 23, 2024Updated last year
- β10May 10, 2024Updated last year
- Init with augmentation lossβ19Feb 7, 2023Updated 3 years ago
- β11Dec 8, 2022Updated 3 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, β¦β55Apr 8, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Deep Vessel Segmentation by Learning Graphical Connectivityβ99Oct 15, 2019Updated 6 years ago
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensitiβ¦β28Apr 3, 2026Updated last week
- β16May 16, 2024Updated last year
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI spaceβ50Jul 19, 2022Updated 3 years ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labelingβ43Jan 9, 2024Updated 2 years ago
- A small utility repo for checkerboard samplingβ11Jul 28, 2025Updated 8 months ago
- β10Jun 2, 2023Updated 2 years ago