just get your chrom sizes
☆17Mar 17, 2026Updated 7 months ago
Alternatives and similar repositories for chromsize
Users that are interested in chromsize are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SQL dialect for genomic range operations☆10Sep 14, 2026Updated last month
- StripePy recognizes architectural stripes in 3C and Hi-C contact maps using geometric reasoning☆13Oct 19, 2026Updated last week
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Computer vision based program for pattern recognition in chromosome (Hi-C) contact maps☆71Sep 15, 2026Updated last month
- fastest GTF/GFF-to-BED converter chilling around☆32Jun 16, 2026Updated 4 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Performance-critical tools to manipulate, analyze, and process genomic interval data☆30Oct 13, 2026Updated 2 weeks ago
- Python bindings for hictk: read and write .cool and .hic files directly from Python☆16Oct 19, 2026Updated last week
- genome annotation (RNAseq and TE) pipeline (draft)☆14Sep 17, 2026Updated last month
- Fast long-read RNA-seq mapping to a transcriptome with locally consistent parsing☆21Oct 24, 2026Updated last week
- Fontanka is a set of tools to work with fountains in Hi-C data. It aims to provide a flexible Python API and specialized CLI for calling …☆13Dec 22, 2025Updated 10 months ago
- A R package for QTLseq.☆13Jun 17, 2026Updated 4 months ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 10 months ago
- Command line tool to plot genomic coverage from a BAM file☆14Apr 5, 2023Updated 3 years ago
- Python implementation of barrnap (Bacterial ribosomal RNA predictor)☆29Jun 14, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scripts and how-tos for comparative genomics work.☆10Apr 25, 2023Updated 3 years ago
- Oxbow makes genomic data ready for high-performance analytics.☆169Sep 21, 2026Updated last month
- high-performance BED-to-GTF converter written in Rust☆21Aug 9, 2026Updated 2 months ago
- A terminal UI for monitoring Snakemake workflows☆26Jul 20, 2026Updated 3 months ago
- PCaDB - a comprehensive and interactive database for transcriptomes from prostate cancer population cohorts☆10Dec 29, 2021Updated 4 years ago
- trackc aims to produce beautiful genome tracks that are highly customizable☆19Jun 6, 2026Updated 4 months ago
- BioPerl scripts and utilities☆11Sep 2, 2025Updated last year
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆40Jan 22, 2025Updated last year
- Homology-based ANI estimation at unprecedented scales🦀☆25Oct 4, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆12Jan 11, 2024Updated 2 years ago
- Variant sequence context analysis tool☆10Jul 5, 2024Updated 2 years ago
- Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation☆84Jan 24, 2025Updated last year
- An R package for plotting GWAS results from the GAPIT package☆14Oct 20, 2026Updated last week
- do some exercise☆15Dec 2, 2025Updated 10 months ago
- High throughput python tool for mining and analysis of gene duplications.☆16Jul 30, 2026Updated 3 months ago
- A high-performance BigWig and BigBed library in Rust☆128Aug 14, 2026Updated 2 months ago
- Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.☆11Jan 6, 2026Updated 9 months ago
- Chromosome polymer simulations and in silico capture experiments☆68Oct 4, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆23Aug 12, 2026Updated 2 months ago
- a versatile toolkit for processing and analyzing diverse types of sequence data☆24May 19, 2026Updated 5 months ago
- A high-performance search engine for large-scale genomic interval datasets☆20Sep 1, 2021Updated 5 years ago
- 基因组组装 注释流程及脚本☆15Feb 12, 2023Updated 3 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Jun 23, 2016Updated 10 years ago
- Fast manhattenplots using ggplot2☆14Apr 24, 2026Updated 6 months ago
- Detailed bioinformatics scripts and methods used in the Maize-Pan-genome paper.☆17Oct 8, 2025Updated last year