VladimirShitov / nafig
"NA Figure": visualization of the missing data distribution
☆15Updated last year
Alternatives and similar repositories for nafig:
Users that are interested in nafig are comparing it to the libraries listed below
- Materials for Transcripromics Data Analysis course at Moscow State University☆62Updated 10 months ago
- ☆10Updated 8 months ago
- Fast-ish (and correct!) quantile normalization in Python.☆30Updated 7 months ago
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆181Updated last month
- A genome browser in your Jupyter notebook☆30Updated 2 months ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆82Updated 3 years ago
- A library for full-stack aging clocks design and benchmarking.☆29Updated 3 weeks ago
- This is repo for the materials of the BI2023 python course☆20Updated 9 months ago
- ClinVar Mapping and Annotation Toolkit☆19Updated this week
- Code for the CRISPOR article, all data and code to create figures and analysis☆40Updated 8 years ago
- Course "Machine learning" in Bioinformatics Institute☆16Updated 9 months ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆45Updated last month
- IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.☆27Updated last year
- Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project☆115Updated last month
- Elucidating the Utility of Genomic Elements with Neural Nets☆65Updated 2 months ago
- Normalization of RNA-seq gene expression☆83Updated 3 weeks ago
- Detecting methylation using signal-level features from Nanopore sequencing reads☆112Updated last year
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆44Updated last year
- Applied Python Programming for Life Scientists☆25Updated 3 years ago
- Public repository for ShapeMapper 2 releases☆32Updated 2 months ago
- A python program to call methylation (m6A in DNA) from nanopore signal data☆45Updated 3 years ago
- A versatile tool to perform pile-up analysis on Hi-C data in .cool format.☆78Updated 3 months ago
- NANOME pipeline (Nanopore long-read sequencing data consensus DNA methylation detection)☆30Updated 11 months ago
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆155Updated this week
- Detection of m6A from direct RNA-Seq data☆116Updated last week
- ☆86Updated last month
- A high-fidelity E. coli RNA-seq compendium☆33Updated 3 years ago
- Shepherd: accurate clustering for correcting DNA barcode errors: https://doi.org/10.1093/bioinformatics/btac395☆10Updated last year
- Infer selection pressures on features of amino acid CDR3 sequences.☆24Updated 10 months ago
- A method for identifying deleterious protein variation.☆11Updated 8 years ago