TeamMacLean / blastjsLinks
a BLAST+ wrapper for Node.js
☆12Updated 7 years ago
Alternatives and similar repositories for blastjs
Users that are interested in blastjs are comparing it to the libraries listed below
Sorting:
- Efficient and comprehensive metadata acquisition from the NCBI databases (includes SRA).☆50Updated 3 years ago
- simuG: a general-purpose genome simulator☆99Updated 7 months ago
- Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.☆70Updated 5 years ago
- Read Assignment, Mapping, and Phylogenetic Analysis in Real Time☆82Updated 10 months ago
- MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a …☆37Updated 3 years ago
- Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.☆103Updated 2 months ago
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- Workflow Description Language (WDL) scripts for common vg workflows☆21Updated last month
- Interactive visualization of assembly graphs☆83Updated 3 years ago
- ☆36Updated last year
- 🔗Genome assembly scaffolder using minimizer graphs☆85Updated last year
- Assembling the cause of phenotypes and genotypes from NGS data☆29Updated 5 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- ✏️ Genome assembly polishing & SNV detection☆72Updated 4 months ago
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆97Updated 8 months ago
- An Oxford Nanopore Basecaller☆70Updated 4 years ago
- Transcripts annotation and GO enrichment Fisher tests☆27Updated 2 years ago
- ☆32Updated 2 months ago
- Highly customizable, ambiguity-aware dotplots for visual sequence analyses☆102Updated last week
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆45Updated 4 years ago
- Detecting multi-genome synteny using minimizer graph mapping☆99Updated this week
- A versatile sequenced read processor for nanopore direct RNA sequencing☆82Updated 5 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 3 years ago
- ☆26Updated 6 years ago
- A fork of exonerate: a generic tool for sequence alignment☆71Updated 2 years ago
- ☆119Updated 3 months ago
- ☆33Updated 8 years ago
- A snakemake-based pipeline for assembling and polishing long genomes from long nanopore reads☆67Updated 4 years ago
- A robust and fast clustering method for amplicon-based studies☆144Updated 3 months ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆43Updated 5 months ago