A tool kit to manage many variant on desktop computer
☆13Jan 13, 2026Updated 7 months ago
Alternatives and similar repositories for variantplaner
Users that are interested in variantplaner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RNAseq pipeline for alternative splicing junctions☆15Mar 26, 2026Updated 4 months ago
- WebApp for DNA variants interpretation☆16Updated this week
- Convert vcf in parquet☆32Jan 23, 2025Updated last year
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- These scripts reformat a VCF into a SQLite database, with R☆15Jul 15, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A new tool to infer sex from massively parallel sequencing data.☆17May 16, 2025Updated last year
- mon blog disponible sur dridk.me☆11Oct 28, 2024Updated last year
- ☆27Mar 2, 2026Updated 5 months ago
- Splicing Prediction Pipeline☆15Aug 12, 2023Updated 3 years ago
- Clonal structure identification through penalizing pairwise differences☆11Jul 22, 2026Updated 3 weeks ago
- PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.☆18Feb 11, 2025Updated last year
- A rust crate providing a vector like struct that stores data as runs of identical values.☆15Feb 19, 2021Updated 5 years ago
- A Python library for performing DNA fragment-analysis☆14Aug 28, 2018Updated 7 years ago
- A pipeline for the identification of Compound Heterozygous Variants☆10Nov 10, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Oct 11, 2024Updated last year
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆18Mar 10, 2022Updated 4 years ago
- A standalone and free application to explore genetics variations from VCF file☆108Mar 31, 2026Updated 4 months ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆15Jan 27, 2023Updated 3 years ago
- simple viewer for variant call format using htslib☆33Jan 17, 2017Updated 9 years ago
- VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF f…☆19Oct 27, 2021Updated 4 years ago
- Curated list of resources for variant prioritization☆15Nov 18, 2025Updated 8 months ago
- C++ wrapper to tabix indexer☆17Jun 27, 2025Updated last year
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Aug 4, 2026Updated last week
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 10 months ago
- Contains the description of a file format to store kmers and associated values☆34Aug 17, 2022Updated 3 years ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- CutePeaks is a standalone Sanger trace viewer steered by a modern and user-friendly UI.☆48May 5, 2026Updated 3 months ago
- A nextflow pipeline for calling exome CNVs☆14Aug 4, 2026Updated last week
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- A Snakemake workflow to process single samples or cohorts of Illumina paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4…☆35Jan 13, 2023Updated 3 years ago
- Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.☆16Jul 6, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- A simple script to create a customizable html file from an AnnotSV output.☆22Apr 20, 2026Updated 3 months ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- an open, searchable, community-curated page index☆18Jun 17, 2024Updated 2 years ago
- do some exercise☆15Dec 2, 2025Updated 8 months ago
- An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice☆11Jun 5, 2023Updated 3 years ago
- ☆11Dec 9, 2022Updated 3 years ago