mhaft / DeepVessLinks
β30Updated last year
Alternatives and similar repositories for DeepVess
Users that are interested in DeepVess are comparing it to the libraries listed below
Sorting:
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ75Updated 4 years ago
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ53Updated last year
- Very fast greedy diffeomorphic registration codeβ83Updated 3 weeks ago
- Neuroimaging in PyTorchβ100Updated this week
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templatesβ50Updated 3 years ago
- Multi-modal Image Registration And Connectivity anaLysisβ47Updated last week
- Implementation of the DeepVesselNet deep learning networkβ153Updated 2 years ago
- Library for generating images by sampling a GMM conditioned on label mapsβ27Updated last year
- An open-source application for the analysis and visualization of segmented vasculature datasetsβ127Updated last year
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proceβ¦β29Updated 4 years ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vesselsβ¦β50Updated 2 years ago
- Application for analysis and modelling of volumetric medical imaging dataβ30Updated last year
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Instβ¦β71Updated 3 years ago
- Deep Learning Registration of the Prostateβ56Updated last year
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utiliβ¦β175Updated 2 months ago
- Cerebrovascular Image Analysis - (Matlab) Toolkitβ26Updated 3 years ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registrationβ73Updated 2 months ago
- β35Updated 6 years ago
- β22Updated 4 years ago
- [WACV 2024] AnyStar: Domain randomized universal star-convex 3D instance segmentationβ17Updated 4 months ago
- PyTorch implementation of HighRes3DNetβ54Updated 6 months ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.β56Updated 5 months ago
- Python scripts to read and write the CREMI hdf5 file format.β39Updated 2 years ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastixβ57Updated last month
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,β¦β104Updated 3 months ago
- β32Updated 3 years ago
- Open library for LDDMM and Metamorphosis in PyTorchβ24Updated last month
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.β160Updated 3 years ago
- Python Vascular Network Analysisβ26Updated 5 months ago
- β23Updated 3 years ago