mhaft / DeepVess
β29Updated last year
Alternatives and similar repositories for DeepVess:
Users that are interested in DeepVess are comparing it to the libraries listed below
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ70Updated 3 years ago
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ47Updated 10 months ago
- Very fast greedy diffeomorphic registration codeβ71Updated last week
- Image mapping using the LDDMM algorithm, implemented in tensorflowβ16Updated 3 years ago
- Library for generating images by sampling a GMM conditioned on label mapsβ25Updated last year
- Python scripts to read and write the CREMI hdf5 file format.β38Updated 2 years ago
- Python implementation of 2d and 3d image registrationβ33Updated 3 years ago
- β62Updated last month
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templatesβ50Updated 2 years ago
- Python Implementation of the LDDMM algorithmβ51Updated 4 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Instβ¦β67Updated 2 years ago
- Simple watershed and agglomeration library for affinity graphs.β22Updated 5 months ago
- MIRTK based SVR reconstructionβ50Updated 2 weeks ago
- Multi-modal Image Registration And Connectivity anaLysisβ43Updated this week
- Open library for LDDMM and Metamorphosis in PyTorchβ23Updated 2 weeks ago
- An abundance of augmentation layersβ16Updated last week
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.β53Updated 3 months ago
- β28Updated 3 years ago
- panoptica -- instance-wise evaluation of 3D semantic and instance segmentation mapsβ23Updated this week
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proceβ¦β29Updated 3 years ago
- This executable file is used for 3D brain MRI registrationβ24Updated 5 years ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registrationβ40Updated this week
- A 3D Slicer extension for efficient segmentation with nnInteractive.β43Updated this week
- Cerebrovascular Image Analysis - (Matlab) Toolkitβ24Updated 2 years ago
- β19Updated 3 years ago
- β20Updated 3 years ago
- Developing a Brain Atlas through Deep Learningβ52Updated last year
- Robust Brain Extraction Tool for CT Head Imagesβ46Updated 4 years ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.β20Updated last year
- CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masksβ17Updated 5 years ago