mhaft / DeepVessLinks
β29Updated last year
Alternatives and similar repositories for DeepVess
Users that are interested in DeepVess are comparing it to the libraries listed below
Sorting:
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ74Updated 4 years ago
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ52Updated last year
- Neuroimaging in PyTorchβ99Updated 3 weeks ago
- Very fast greedy diffeomorphic registration codeβ80Updated 5 months ago
- Multi-modal Image Registration And Connectivity anaLysisβ45Updated last week
- Library for generating images by sampling a GMM conditioned on label mapsβ27Updated last year
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templatesβ50Updated 2 years ago
- Implementation of the DeepVesselNet deep learning networkβ152Updated 2 years ago
- Cerebrovascular Image Analysis - (Matlab) Toolkitβ26Updated 3 years ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proceβ¦β29Updated 3 years ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registrationβ53Updated last week
- PyTorch implementation of HighRes3DNetβ55Updated 3 months ago
- Robust Brain Extraction Tool for CT Head Imagesβ49Updated 5 years ago
- β92Updated 4 months ago
- MIRTK based SVR reconstructionβ59Updated 6 months ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utiliβ¦β169Updated 5 months ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vesselsβ¦β49Updated last year
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Instβ¦β71Updated 2 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, β¦β54Updated 7 months ago
- An open-source application for the analysis and visualization of segmented vasculature datasetsβ123Updated last year
- β22Updated 4 years ago
- Application for analysis and modelling of volumetric medical imaging dataβ28Updated last year
- β100Updated 3 weeks ago
- GPU and CPU implementation of LDDMM image registrationβ61Updated 10 months ago
- β35Updated 6 years ago
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Prβ¦β67Updated 6 years ago
- Python scripts to read and write the CREMI hdf5 file format.β39Updated 2 years ago
- This executable file is used for 3D brain MRI registrationβ25Updated 6 years ago
- Deep Learning Registration of the Prostateβ56Updated last year
- β23Updated 3 years ago