Alternatives and similar repositories for DeepVess

Users that are interested in DeepVess are comparing it to the libraries listed below

• vessap / vessap
  Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning
  ☆71Updated 3 years ago
• RUB-Bioinf / VesselExpress
  🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
  ☆47Updated last year
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆77Updated 3 weeks ago
• BBillot / lab2im
  Library for generating images by sampling a GMM conditioned on label maps
  ☆25Updated last year
• icometrix / gmm-augmentation
  ☆20Updated 3 years ago
• rohitrango / FireANTs
  Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration
  ☆44Updated last month
• zjx1805 / ArteryNetwork
  A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…
  ☆29Updated 3 years ago
• dtward / image_lddmm_tensorflow
  Image mapping using the LDDMM algorithm, implemented in tensorflow
  ☆16Updated 3 years ago
• dtward / image-registration-summer-school-2018
  Python notebooks and data for learning about image registration. Hosted at a summer school
  ☆9Updated 6 years ago
• balbasty / cornucopia
  An abundance of augmentation layers
  ☆15Updated last month
• rohitrango / Magic-or-Mirage
  [NeurIPS 2024] Deep Learning in Medical Image Registration: Magic or Mirage?
  ☆15Updated 8 months ago
• physimals / quantiphyse
  Application for analysis and modelling of volumetric medical imaging data
  ☆28Updated last year
• neel-dey / Atlas-GAN
  [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates
  ☆50Updated 2 years ago
• KCL-BMEIS / NiftySeg
  ☆29Updated 3 years ago
• CIG-UCL / polaffini
  Polaffini - Feature-based affine and polyaffine registration.
  ☆13Updated this week
• BlueBrain / VessMorphoVis
  A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…
  ☆44Updated last year
• prediction2020 / unet-vessel-segmentation
  ☆34Updated 5 years ago
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆22Updated 6 months ago
• cremi / cremi_python
  Python scripts to read and write the CREMI hdf5 file format.
  ☆38Updated 2 years ago
• RivuletStudio / rivuletpy
  Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…
  ☆68Updated 2 years ago
• sergivalverde / MRI_intensity_normalization
  Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000
  ☆59Updated 3 years ago
• SteffenCzolbe / pyLDDMM
  Python Implementation of the LDDMM algorithm
  ☆52Updated 4 years ago
• VTrails / VTrailsToolkit
  Cerebrovascular Image Analysis - (Matlab) Toolkit
  ☆24Updated 2 years ago
• hilbysfe / brain-vessel-segmentation
  BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease
  ☆40Updated 5 years ago
• chcomin / pyvane
  Python Vascular Network Analysis
  ☆24Updated last year
• multimodallearning / convexAdam
  highest ranked algorithm of Learn2Reg requires little to no training and runs within seconds
  ☆61Updated 3 months ago
• ilwoolyu / LocalGyrificationIndex
  LGI: Cortical Shape-Adaptive Local Gyrification Index
  ☆12Updated 4 years ago
• MICLab-Unicamp / CONSNet
  CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masks
  ☆17Updated 5 years ago
• antonfrancois / Demeter_metamorphosis
  Open library for LDDMM and Metamorphosis in PyTorch
  ☆23Updated last week
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆94Updated last month