rundherum / pymiaView external linksLinks
pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
☆61Nov 22, 2024Updated last year
Alternatives and similar repositories for pymia
Users that are interested in pymia are comparing it to the libraries listed below
Sorting:
- Medical Image Analysis Lab (MIALab), University of Bern☆30May 24, 2024Updated last year
- Deep learning for mortality prediction from low-dose CT images☆13Aug 30, 2020Updated 5 years ago
- O-MedAL: Online Active Deep Learning for Medical Image Analysis. This repo contains code for the paper.☆18Mar 20, 2022Updated 3 years ago
- Code for the Medical Segmentation Decathlon Challenge at MICCAI 2018☆17Oct 31, 2018Updated 7 years ago
- Convert the TotalSegmentator dataset into the nnUNet format☆19Aug 1, 2023Updated 2 years ago
- Accepted in MIDL 2020☆32Apr 22, 2021Updated 4 years ago
- Adversarial Policy Gradient for Medical Deep Learning Image Augmentation☆13Oct 11, 2019Updated 6 years ago
- Medical imaging processing for AI applications.☆2,357Updated this week
- Medical image analysis framework merging ANTsR and deep learning☆67Jul 20, 2025Updated 6 months ago
- Code for the MICCAI 2019 paper Balsiger et al., Learning Shape Representation on Sparse Point Clouds for Volumetric Image Segmentation☆19Nov 22, 2022Updated 3 years ago
- Toolkit for analysis of radiotherapy data☆13Jan 4, 2026Updated last month
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Oct 29, 2021Updated 4 years ago
- PyTorch examples powered by Lightning☆12Dec 28, 2022Updated 3 years ago
- Easy Volumetric Segmentation with Deep Learning☆28Jan 25, 2026Updated 3 weeks ago
- Develop plan optimization models for knowledge-based planning in radiotherapy☆23Dec 28, 2024Updated last year
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆26Jan 6, 2023Updated 3 years ago
- Medical Image Radiomics Processor☆77Updated this week
- Data driven 3D brain visualisation of semiology. Semiology to anatomy translator based on over 4600 patients from 309 peer-reviewed artic…☆11Sep 21, 2023Updated 2 years ago
- Automated subdivision of white matter hyperintensities☆12Jan 3, 2022Updated 4 years ago
- The first GANs-based omics-to-omics translation framework☆15Sep 5, 2023Updated 2 years ago
- Code for paper "A Semi-Automated Usability Evaluation Framework for Interactive Image Segmentation Systems"☆13Jun 17, 2024Updated last year
- TMI dose prediction☆12Jun 8, 2021Updated 4 years ago
- Code accompanying the paper "Radiomics for glioblastoma survival analysis in pre-operative MRI: exploring feature robustness, class bound…☆11Aug 9, 2020Updated 5 years ago
- deep neural network-based image translation/synthesis☆27Sep 24, 2021Updated 4 years ago
- This repository supports the BENDER series of videos for the MICCAI Education Challenge, 2022.☆13Oct 6, 2025Updated 4 months ago
- Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]☆40Feb 9, 2023Updated 3 years ago
- Algorithm to simulate resection surgery on brain MRI scans. Published in MICCAI 2020, extended in IJCARS.☆14Jan 22, 2026Updated 3 weeks ago
- Show ML predictions w/ Streamlit☆12Apr 2, 2024Updated last year
- arxiv-daily☆13Jan 25, 2023Updated 3 years ago
- Learning joint Segmentation of Tissues And Brain Lesions (jSTABL) from task-specific hetero-modal domain-shifted datasets☆13Mar 24, 2025Updated 10 months ago
- A Slicer extension to provide a GUI around pyradiomics☆115Oct 24, 2025Updated 3 months ago
- ☆14May 29, 2021Updated 4 years ago
- About MIMBCD-UI Project☆14Dec 4, 2025Updated 2 months ago
- Compare various deep learning-based knowledge-based planning methods for 3D dose distribution prediction of the head and neck plans.☆15May 4, 2023Updated 2 years ago
- Sequence-to-sequence image and contour prediction library for longitudinal datasets [PMB'23]☆20Apr 8, 2024Updated last year
- Open source code for the paper Enlisting 3D Crop Models and GANs for More Data Efficient and Generalizable Fruit Detection☆17Aug 24, 2024Updated last year
- Federated Learning based Deep Learning. Docs: https://fets-ai.github.io/Front-End/☆93Feb 28, 2024Updated last year
- Code for "BayesAdapter: Being Bayesian, Inexpensively and Robustly, via Bayeisan Fine-tuning"☆32Jul 25, 2024Updated last year
- Tutorial for the WORC Package☆13Aug 13, 2025Updated 6 months ago