rundherum / pymia
pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
☆60Updated 2 months ago
Alternatives and similar repositories for pymia:
Users that are interested in pymia are comparing it to the libraries listed below
- Medical Image Analysis Lab (MIALab), University of Bern☆26Updated 8 months ago
- PyTorch implementation of HighRes3DNet☆49Updated last year
- Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000☆57Updated 3 years ago
- Deep learning based registration for Learn2Reg Challenge (Task 3 : CT Abdominal)☆28Updated 3 years ago
- This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…☆51Updated 2 years ago
- Left Atrial Segmentation Challenge 2013☆22Updated 4 years ago
- VNet for 3d volume segmentation☆44Updated 3 years ago
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates☆50Updated 2 years ago
- Deep learning cardiac segmentation and motion tracking☆26Updated 5 years ago
- Cardiac Image Multi-Atlas Segmentation pipeline (CIMAS)☆49Updated 8 years ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆20Updated last year
- Weakly supervised 3D classification of multi-disease chest CT scans using multi-resolution deep segmentation features via dual-stage CNN …☆33Updated 4 years ago
- Implementation of the DeepVesselNet deep learning network☆143Updated last year
- ☆22Updated 2 years ago
- Official repository for autoPET I+II machine lerning challenge☆66Updated 6 months ago
- A deep learning-based fully unsupervised method for cardiac tagging MRI motion tracking.☆52Updated 8 months ago
- Implementation of GroupRegNet: A Groupwise One-shot Deep Learning-based 4D Image Registration Method☆30Updated 3 years ago
- Computes vesselness scores for 3-dimensional images.☆70Updated 8 years ago
- Code for deep learning-based glioma/tumor growth models☆24Updated 3 years ago
- Brain Lesion Analysis and Segmentation Tool for Computed Tomography☆63Updated last year
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆104Updated last year
- ☆66Updated 10 months ago
- Segmentation of prostate from MRI scans☆45Updated 3 years ago
- Robust Brain Extraction Tool for CT Head Images☆45Updated 4 years ago
- Repository for Vesselness algorithms☆46Updated 8 months ago
- Docker for running stroke lesion core segmentation☆29Updated 4 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆69Updated 6 months ago
- ICH Segmentation of CT scans☆26Updated 2 weeks ago
- Image, point set, and surface registration in PyTorch.☆27Updated 2 months ago
- ☆39Updated 7 years ago