Alternatives and similar repositories for pymia

Users that are interested in pymia are comparing it to the libraries listed below

• sergivalverde / MRI_intensity_normalization
  Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000
  ☆60Updated 3 years ago
• ubern-mia / MIALab
  Medical Image Analysis Lab (MIALab), University of Bern
  ☆30Updated last year
• muschellij2 / ichseg
  ICH Segmentation of CT scans
  ☆27Updated 3 weeks ago
• fepegar / highresnet
  PyTorch implementation of HighRes3DNet
  ☆55Updated 3 months ago
• aqqush / CT_BET
  Robust Brain Extraction Tool for CT Head Images
  ☆49Updated 5 years ago
• jenspetersen / probabilistic-unet
  A PyTorch implementation of the Probabilistic U-Net, applied to probabilistic glioma growth
  ☆43Updated 6 years ago
• MIC-DKFZ / RegRCNN
  This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…
  ☆51Updated 2 years ago
• Slicer / SlicerNotebooks
  Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
  ☆78Updated 3 years ago
• IPMI-ICNS-UKE / gdl-fire-4d
  General deep learning-based fast image registration framework for clinical thoracic 4D CT data
  ☆40Updated 6 years ago
• TheoEst / abdominal_registration
  Deep learning based registration for Learn2Reg Challenge (Task 3 : CT Abdominal)
  ☆32Updated 3 years ago
• NIC-VICOROB / stroke-core-ct-segmentation
  Docker for running stroke lesion core segmentation
  ☆29Updated 4 years ago
• neel-dey / Atlas-GAN
  [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates
  ☆50Updated 2 years ago
• RSIP-Vision / medio
  Medical images I/O python package
  ☆34Updated last month
• ai-med / quickNAT_pytorch
  PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…
  ☆105Updated 4 years ago
• anindox8 / Deep-Segmentation-Features-for-Weakly-Supervised-3D-Disease-Classification-in-Chest-CT
  Weakly supervised 3D classification of multi-disease chest CT scans using multi-resolution deep segmentation features via dual-stage CNN …
  ☆34Updated 5 years ago
• biomedia-mira / blast-ct
  Brain Lesion Analysis and Segmentation Tool for Computed Tomography
  ☆70Updated 2 years ago
• TheoEst / joint_registration_tumor_segmentation
  ☆23Updated 3 years ago
• JonasLamy / LiverVesselness
  Repository for Vesselness algorithms
  ☆47Updated 2 weeks ago
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆99Updated 2 weeks ago
• andreped / livermask
  💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model
  ☆70Updated last year
• j-duan / 4Dsegment
  Deep learning cardiac segmentation and motion tracking
  ☆26Updated 5 years ago
• FabianIsensee / BatchViewer
  A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
  ☆51Updated 8 months ago
• BMIRDS / 3dMRISegmentation
  Code for NeuroImage: Clinical paper "Automatic post-stroke lesion segmentation on MR images using 3D residual convolutional neural networ…
  ☆33Updated 5 years ago
• Hsuxu / Magic-VNet
  VNet for 3d volume segmentation
  ☆44Updated 4 years ago
• giesekow / deepvesselnet
  Implementation of the DeepVesselNet deep learning network
  ☆152Updated 2 years ago
• baiwenjia / CIMAS
  Cardiac Image Multi-Atlas Segmentation pipeline (CIMAS)
  ☆51Updated 8 years ago
• google-deepmind / tcia-ct-scan-dataset
  Dataset of head and neck CT scans and segmentations in NRRD format.
  ☆98Updated 5 years ago
• ysuter / gbm-data-longitudinal
  This repository contains code used to prepare the LUMIERE Glioblastoma dataset.
  ☆32Updated last year
• jasonccai / HeadCTSegmentation
  Multi-class U-Net for head CT segmentation
  ☆34Updated 4 months ago
• JanaLipkova / s3
  Skull stripping and brain tissue segmentation
  ☆121Updated 6 years ago