balbasty / nitorch
Neuroimaging in PyTorch
☆89Updated last month
Related projects ⓘ
Alternatives and complementary repositories for nitorch
- Very fast greedy diffeomorphic registration code☆67Updated last month
- Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000☆58Updated 2 years ago
- This is a tool to quickly preview nifti images on the terminal☆53Updated last year
- PyTorch implementation of HighRes3DNet☆48Updated last year
- ☆27Updated 2 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆32Updated 3 years ago
- Library for generating images by sampling a GMM conditioned on label maps☆23Updated 7 months ago
- High-throughput Python platform for image reconstruction and analysis☆43Updated 2 months ago
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆139Updated 2 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆62Updated 3 months ago
- Multi-modal Image Registration And Connectivity anaLysis☆31Updated last week
- Implementation of GroupRegNet: A Groupwise One-shot Deep Learning-based 4D Image Registration Method☆29Updated 3 years ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆34Updated last month
- Pre-trained models and utilities for deep learning on medical images in Python☆201Updated this week
- CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masks☆17Updated 5 years ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆78Updated last year
- PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…☆101Updated 3 years ago
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆16Updated 3 years ago
- pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis☆59Updated last month
- MALPEM whole-brain segmentation framework☆21Updated 9 months ago
- Computes vesselness scores for 3-dimensional images.☆70Updated 7 years ago
- Robust Brain Extraction Tool for CT Head Images☆44Updated 4 years ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆146Updated 7 months ago
- An AI-powered open-source medical image analysis toolbox☆58Updated 3 months ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆141Updated 2 months ago
- MIRTK based SVR reconstruction☆46Updated 2 weeks ago
- Simulate realistic diffusion-weighted MR data☆19Updated last year
- The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow too…☆26Updated last year
- Image, point set, and surface registration in PyTorch.☆26Updated last month
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆18Updated 9 months ago