flatironinstitute / nemos
NEural MOdelS, a statistical modeling framework for neuroscience.
☆95Updated this week
Alternatives and similar repositories for nemos:
Users that are interested in nemos are comparing it to the libraries listed below
- ☆51Updated 2 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆98Updated this week
- WIP: Python port of Kilosort2☆50Updated last year
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆51Updated last month
- Region Of Interest Classification and Tracking☆18Updated last week
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 7 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆114Updated 8 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆57Updated this week
- a visualization method for neural data☆222Updated last month
- Decoding and geometrical analysis of neural activity with built-in best practices☆39Updated 3 weeks ago
- Algorithm for automated source extraction from 1P data☆21Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆58Updated last week
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 2 weeks ago
- ☆52Updated 2 months ago
- IBL core shared libraries☆63Updated this week
- Tutorials for using SpikeInterface on extracellular datasets.☆62Updated last year
- A curated list of awesome Neuropixels resources.☆101Updated 2 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆140Updated this week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆120Updated 3 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆87Updated 3 weeks ago
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 4 months ago
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆53Updated 4 years ago
- A Matlab interface for reading and writing NWB files☆52Updated this week
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated last month
- Web app for viewing results of ephys spike sorting☆25Updated last month
- Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals☆19Updated 2 weeks ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago