machenslab / dPCALinks
An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)
☆314Updated last week
Alternatives and similar repositories for dPCA
Users that are interested in dPCA are comparing it to the libraries listed below
Sorting:
- An algorithm for unsupervised discovery of sequential structure☆169Updated last year
- A class for using ML algorithms for spike prediction☆61Updated 7 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆71Updated 5 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆97Updated 3 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- Elephant is the Electrophysiology Analysis Toolkit☆227Updated this week
- Deconvolution of calcium imaging data☆101Updated 10 months ago
- Tools for spike data analysis and visualization☆110Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- A fast and unsupervised algorithm for spike detection and sorting using wavelets and super-paramagnetic clustering☆137Updated 3 years ago
- YASS: Yet Another Spike Sorter☆70Updated 3 years ago
- Recordings of 10k neurons during spontaneous behaviors☆54Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- ☆60Updated 3 years ago
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…☆37Updated 7 years ago
- GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)☆36Updated 3 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆52Updated 2 months ago
- ☆36Updated 4 months ago
- Toolbox for analyzing behavioral videos and neural activity☆59Updated 2 years ago
- Fast and scalable spike sorting in python☆95Updated 4 months ago
- A python package that includes many methods for decoding neural activity☆465Updated 2 years ago
- a visualization method for neural data☆240Updated 8 months ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆53Updated 2 years ago
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data☆134Updated last month