Alternatives and similar repositories for dPCA

Users that are interested in dPCA are comparing it to the libraries listed below

• FeeLab / seqNMF
  An algorithm for unsupervised discovery of sequential structure
  ☆169Updated last year
• pillowlab / GLMspiketraintutorial
  Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data
  ☆96Updated 3 years ago
• KordingLab / spykes
  Tools for spike data analysis and visualization
  ☆109Updated 2 years ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆43Updated 6 years ago
• KordingLab / spykesML
  A class for using ML algorithms for spike prediction
  ☆61Updated 7 years ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆71Updated 5 years ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆47Updated 6 years ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆101Updated 9 months ago
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆60Updated 4 years ago
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆70Updated 3 years ago
• pillowlab / GLMspiketraintutorial_python
  ☆59Updated 3 years ago
• lfads / lfads-run-manager
  Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)
  ☆50Updated 3 years ago
• NeuralEnsemble / elephant
  Elephant is the Electrophysiology Analysis Toolkit
  ☆223Updated this week
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆123Updated last year
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• MouseLand / rastermap
  a visualization method for neural data
  ☆238Updated 6 months ago
• catniplab / NPGLM
  non-parametric inference for convolutional filters in poisson glms
  ☆13Updated 4 years ago
• spyking-circus / spyking-circus
  Fast and scalable spike sorting in python
  ☆95Updated 3 months ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆54Updated last year
• cortex-lab / phy
  phy: interactive visualization and manual spike sorting of large-scale ephys data
  ☆379Updated 2 weeks ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated 2 years ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆50Updated last month
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆39Updated 2 years ago
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• KordingLab / Neural_Decoding
  A python package that includes many methods for decoding neural activity
  ☆459Updated 2 years ago
• themattinthehatt / behavenet
  Toolbox for analyzing behavioral videos and neural activity
  ☆60Updated last year
• NII-Kobayashi / GLMCC
  GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)
  ☆36Updated 3 years ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• cortex-lab / KiloSort
  GPU code for spike sorting
  ☆189Updated last year