NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
☆152Apr 10, 2026Updated 3 months ago
Alternatives and similar repositories for NeuroPyxels
Users that are interested in NeuroPyxels are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆70Apr 22, 2026Updated 2 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆47May 13, 2025Updated last year
- Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.☆246May 25, 2026Updated last month
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆128Aug 18, 2024Updated last year
- cortex lab code for electrophysiology☆84Feb 5, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Fast spike sorting with drift correction☆623Apr 27, 2026Updated 2 months ago
- A Python-based module for creating flexible and robust spike sorting pipelines.☆823Updated this week
- ⚡ Generate channel maps for Neuropixels probes that respect electrode-ADC wiring constraints! ⚡☆60Jul 8, 2026Updated last week
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆79Jul 14, 2026Updated last week
- A curated list of awesome Neuropixels resources.☆143Dec 16, 2025Updated 7 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Feb 5, 2026Updated 5 months ago
- Information about Neuropixels electrode arrays☆97Dec 15, 2024Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆83Jul 9, 2026Updated last week
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆80May 15, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆422Updated this week
- WIP: Python port of Kilosort2☆49Jul 8, 2023Updated 3 years ago
- Metrics for spike sorting validation/quality control☆15Sep 8, 2021Updated 4 years ago
- PYthon Neural Analysis Package☆376Updated this week
- Repository of code, data and CAD files associated with Luo*, Bondy* et al (2020). "An approach for long-term, multi-probe Neuropixels rec…☆11Jul 1, 2025Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆82Jul 10, 2026Updated last week
- A GUI for running popular spike sorting algorithms on extracellular data of any file format.☆15Jun 27, 2021Updated 5 years ago
- Plugins for Phy2☆20May 13, 2025Updated last year
- Histology processing☆77Jul 10, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆16May 5, 2026Updated 2 months ago
- An implementation of piecewise linear time warping for multi-dimensional time series alignment☆191Aug 15, 2024Updated last year
- a visualization method for neural data☆256Apr 4, 2025Updated last year
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆35Dec 5, 2025Updated 7 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆118Updated this week
- A Python API for working with Neurodata stored in the NWB Format☆222Jul 13, 2026Updated last week
- Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…☆361Updated this week
- pyqt5 dependent applications for IBL sessions☆35Jul 7, 2026Updated 2 weeks ago
- Zenith of Event-based Time-locked Anomalies☆15Feb 26, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆63Jan 1, 2026Updated 6 months ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Jan 14, 2022Updated 4 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆107Updated this week
- Elephant is the Electrophysiology Analysis Toolkit☆243Jun 21, 2026Updated last month
- IBL core shared libraries☆68Updated this week
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆115Oct 10, 2025Updated 9 months ago